FastQCFastQC Report
Tue 26 Sep 2023
EGAF00002446282

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002446282
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49786454
Sequences flagged as poor quality0
Sequence length76
%GC64

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG32048756.437242949658556No Hit
GGGAGCGGTCGGGCGGCGGCGGTCGGCGGGCGGCGGGGCGGGGCGGTTCG1012810.20343083682963242No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA701060.14081340277819343No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)