FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002450672

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002450672
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7628
Sequences flagged as poor quality0
Sequence length301
%GC51

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGGAATATTGGACAATGGGGGGAACCCTGATCCAGCCATGCCGCGTGT299139.21080230728894No Hit
TGGGGAATATTGCACAATGGGGGAAACCCTGATGCAGCCATGCCGCGTGT160120.988463555322497No Hit
TGGGGAATATTGGACAATGGGGGAAACCCTGATCCAGCCATGCCGCGTGT115115.089145254326167No Hit
TGGGGAATATTGGACAATGGGCGAAAGCCTGATCCAGCCATGCCGCGTGT3995.230728893550078No Hit
TAGGGAATCTTCCGCAATGGACGAAAGTCTGACGGAGCAATGCCGCGTGA1051.3765076035658104No Hit
TGGGGAATATTGGACAATGGGGGCAACCCTGATCCAGCCATGCCGCGTGT1011.324069218668065No Hit
TAGGGAATCTTCGGCAATGGACGAAAGTCTGACCGAGCAACGCCGCGTGA590.7734661772417409No Hit
TGGGGAATATTGCACAATGGGGGAAACCCTGATGCAGCGACGCCGCGTGG330.4326166754063975No Hit
TGGGGAATATTGCACAATGGGGGAAACCCTGATGCAGCCACGCCGCGTGT240.3146303093864709No Hit
TGGGGAATATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGA210.275301520713162No Hit
TGGGGAATATTGCACAATGGGGGAAACCCTGATGCAGCGACGCCGCGTGA190.24908232826428944No Hit
TGGGGAATATTGGACAATGGGGGGAACCCTGATCCAGCCATGCCGCGTGA190.24908232826428944No Hit
TGGGGAATATTGCACAATGGGGGGAACCCTGATCCAGCCATGCCGCGTGT190.24908232826428944No Hit
TGGGGAATATTGCACAATGGGGGGAACCCTGATGCAGCCATGCCGCGTGT180.23597273203985317No Hit
TGGGGAATATTGGACAATGGGGGAAACCCTGATCCAGCCATGCCGCGTGA150.19664394336654428No Hit
TGGGGAATATTGGACAATGGGGGGAACCCTGATCCAGCCATGCCGCGTGG150.19664394336654428No Hit
TGGGGAATATTGGACAATGGGGGGAACCCTGATCCAGCCATGCAGCGTGT120.15731515469323545No Hit
TGGGGAATATTGGACAATGGGGGGAACCCTGATCCAGCCACGCCGCGTGT120.15731515469323545No Hit
TGGGGAATATTGGACAATGGGGGGAACCCTGCTCCAGCCATGCCGCGTGT110.14420555846879915No Hit
TGGGGAATATTGGGCAATGGGCGCAAGCCTGACCCAGCAACGCCGCGTGA110.14420555846879915No Hit
TGGGGAATATTGGACAATGGGGGAAACCCTGATCCAGCCACGCCGCGTGT110.14420555846879915No Hit
TGAGGAATATTGGTCAATGGGCGATGGCCTGAACCAGCCAAGTAGCGTGA100.13109596224436287No Hit
TGGGGAATATTGCACAATGGGCGAAAGCCTGATGCAGCCATGCCGCGTGT100.13109596224436287No Hit
TGAGGAATATTGGTCAATGGACGAGAGTCTGAACCAGCCAAGTAGCGTGA100.13109596224436287No Hit
TGGGGAATATTGCACAATGGGGGAAACCCTGATGCAGCCATGCCGCGTGA100.13109596224436287No Hit
TGGGGAATATTGCACAATGGGCGCAAGCCTGATGCAGCCATGCCGCGTGT100.13109596224436287No Hit
TGAGGAATATTGGACAATGGGCGCAAGCCTGATCCAGCCATGCCGCGTGC90.11798636601992658No Hit
TGGGGAATATTGGACAATGGGGGAACCCTGATCCAGCCATGCCGCGTGTG90.11798636601992658No Hit
TGAGGAATATTGGTCAATGGACGCAAGTCTGAACCAGCCATGCCGCGTGC90.11798636601992658No Hit
TGGGGAATATTGGACAATGGGGGGAACCCTGAACCAGCCATGCCGCGTGT90.11798636601992658No Hit
TGGGGAATATTGCACAATGGGGGAAACCCTGATCCAGCCATGCCGCGTGT90.11798636601992658No Hit
TGAGGAATATTGGTCAATGGGCGAGAGCCTGAACCAGCCAAGTAGCGTGA90.11798636601992658No Hit
TGGGGAATATTGCACAATGGGCGAAAGCCTGATGCAGCAACGCCGCGTGA80.1048767697954903No Hit
TGGGGAATCTTGGACAATGGGGGGAACCCTGATCCAGCCATGCCGCGTGT80.1048767697954903No Hit
TGGGGAATATTGCACAATGGGGGAAACCCTGATGCAGCAATGCCGCGTGT80.1048767697954903No Hit
TGGGGAATATTGCACAATGGGGGCAACCCTGATGCAGCCATGCCGCGTGT80.1048767697954903No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)