FastQCFastQC Report
Tue 13 Sep 2022
EGAF00002452733

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002452733
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27529123
Sequences flagged as poor quality0
Sequence length20-75
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2586390.9395104958483421No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA490080.17802238015355593No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG417270.15157402580532622No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT335520.12187820149592125No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)