FastQCFastQC Report
Tue 9 May 2023
EGAF00002452789

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002452789
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31178391
Sequences flagged as poor quality0
Sequence length20-75
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1860600.5967594671578788No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG347360.11141049581423236No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)