FastQCFastQC Report
Sat 22 Oct 2022
EGAF00002453222

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002453222
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44733683
Sequences flagged as poor quality0
Sequence length51
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGAAAACCACGAGGAAGAGAGGTAGCGTTTTCTCCTGAGCGTGAAGCCGG559410.1250534189192515No Hit
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAA554250.12389992570028271No Hit
CATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCG465240.10400216767307087No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)