FastQCFastQC Report
Sun 23 Oct 2022
EGAF00002453606

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002453606
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71540412
Sequences flagged as poor quality0
Sequence length51
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1684160.23541379661050876No Hit
CCGAAAACCACGAGGAAGAGAGGTAGCGTTTTCTCCTGAGCGTGAAGCCGG768480.10741900675662869No Hit
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAA767510.10728341905551228No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)