FastQCFastQC Report
Sat 22 Oct 2022
EGAF00002453852

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002453852
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38462613
Sequences flagged as poor quality0
Sequence length51
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGGAGGTCACTCTCCCCAGGCTCTGTCCAAGTGGCATAGGGGAGCTTAG822400.2138180263519798No Hit
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAA537640.1397824947566615No Hit
CATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCG448030.1164845456547635No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)