FastQCFastQC Report
Fri 1 Jul 2022
EGAF00002456053

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002456053
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29625050
Sequences flagged as poor quality0
Sequence length3-76
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGAAGTGAGCTACAACGTAGTACGTGTCGTGTAGTACGATGTCTAGTG504010.1701296706672225No Hit
AGAGAAATGAATGAGCCTACAGATGATAGGATGTTTCATGTGGTGTATGC482310.16280478851512487No Hit
CCCGTATCGAAGGCCTTTTTGGACAGGTGGTGTGTGGTGGCCTTGGTATG433820.14643688365082927No Hit
AAATGAATGAGCCTACAGATGATAGGATGTTTCATGTGGTGTATGCATCG415900.14038794871232285No Hit
GTTAGGTCTACGGAGGCTCCAGGGTGGGAGTAGTTCCCTGCTAAGGGAGG372920.12587995632074883No Hit
GGCAAATACAGCTCCTATTGATAGGACATAGTGGAAGTGAGCTACAACGT371810.12550527340882126No Hit
GTCGTGTAGTACGATGTCTAGTGATGAGTTTGCTAATACAATGCCAGTCA356530.12034747620679122No Hit
GCTCAGAGCACTGCAGCAGATCATTTCATATTGCTTCCGTGGAGTGTGGC348390.11759980151932234No Hit
GTTTGGTCTAGGGTGTAGCCTGAGAATAGGGGAAATCAGTGAATGAAGCCTCCTATGATGGCAAATACAGCTCCT338100.11412638966010184No Hit
GGTGTATGCATCGGGGTAGTCCGAGTAACGTCGGGGCATTCCGGATAGGC320600.10821922663421665No Hit
GTGGTGTATGCATCGGGGTAGTCCGAGTAACGTCGGGGCATTCCGGATAGGCCGAGAAAGTGTTGTGGGAAGAA314570.10618378703158306No Hit
CGATAACGTTGTAGATGTGGTCGTTACCTAGAAGGTTGCCTGGCTGGCCCAGCTCGGCTCGAATAAGGAGGCTT314310.10609602346662707No Hit
GTGGAGTGTGGCGAGTCAGCTAAATACTTTGACGCCGGTGGGGATAGCGA305880.10325045864901494No Hit
GTGATGAGTTTGCTAATACAATGCCAGTCAGGCCACCTACGGTGAAGAGA300480.10142767691531322No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)