FastQCFastQC Report
Fri 1 Jul 2022
EGAF00002456130

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002456130
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50937556
Sequences flagged as poor quality0
Sequence length11-76
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCGTATCGAAGGCCTTTTTGGACAGGTGGTGTGTGGTGGCCTTGGTATG852910.1674422699039585No Hit
AGAGAAATGAATGAGCCTACAGATGATAGGATGTTTCATGTGGTGTATGC574640.11281263671150614No Hit
CGATAACGTTGTAGATGTGGTCGTTACCTAGAAGGTTGCCTGGCTGGCCCAGCTCGGCTCGAATAAGGAGGCTT528300.10371522340019612No Hit
GTGGAAGTGAGCTACAACGTAGTACGTGTCGTGTAGTACGATGTCTAGTG513670.10084307931852875No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)