FastQCFastQC Report
Sat 3 Sep 2022
EGAF00002458426

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002458426
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences193363
Sequences flagged as poor quality0
Sequence length35-301
%GC52

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT156768.107031852008916No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT140907.286812885608933No Hit
CCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT101995.274535459214017No Hit
CCTACGGGCGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT95104.918210826269762No Hit
CCTACGGGGGGCTGCAGTGATTAACCTTTAGCAATAAACGAAAGTTTAAC63123.264326680905861No Hit
CCTACGGGTGGCTGCAGTGATTAACCTTTAGCAATAAACGAAAGTTTAAC58803.040912687535878No Hit
CCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT45552.3556730087969258No Hit
CCTACGGGCGGCTGCAGTGATTAACCTTTAGCAATAAACGAAAGTTTAAC41642.153462658316224No Hit
CCTACGGGGGGCTGCAGTGGGGAATATTGGACAATGGGGGCAACCCTGAT37521.9403919053800365No Hit
CCTACGGGAGGCTGCAGTGATTAACCTTTAGCAATAAACGAAAGTTTAAC36921.90936218407865No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN34561.787311946959863No Hit
CCTACGGGGGGCTGCAGTGATAAACCTTTAGCAATAAACGAAAGTTTAAC33161.7149092639232946No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGGACAATGGGGGCAACCCTGAT32371.6740534642098022No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT26981.3953031345190134No Hit
CCTACGGGAGGCTGCAGTGGGGAATATTGGACAATGGGGGCAACCCTGAT23281.2039531864937967No Hit
CCTACGGGTGGCTGCAGTGATAAACCTTTAGCAATAAACGAAAGTTTAAC23231.2013673763853479No Hit
CCTACGGGCGGCTGCAGTGGGGAATATTGGACAATGGGGGCAACCCTGAT22381.157408604541717No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT21991.1372392856958156No Hit
CCTACGGGGGGCAGCAGTGATTAACCTTTAGCAATAAACGAAAGTTTAAC19991.0338068813578607No Hit
CCTACGGGCGGCTGCAGTGATAAACCTTTAGCAATAAACGAAAGTTTAAC18790.9717474387550875No Hit
CCTACGGGAGGCTGCAGTGATAAACCTTTAGCAATAAACGAAAGTTTAAC18050.9334774491500442No Hit
CCTACGGGCGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT16800.8688321964388223No Hit
CCTACGGGGTGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT14800.7653997921008673No Hit
CCTACGGGTGGCAGCAGTGATTAACCTTTAGCAATAAACGAAAGTTTAAC12400.6412809068953212No Hit
CCTACGGGGGGCTGCAGAGTCAGCTGTAGCAGTGGAGGCTGAGGCCCTCT11490.5942191629215516No Hit
CCTACGGGGGGCAGCAGTGGGGAATATTGGACAATGGGGGCAACCCTGAT11190.5787043022708585No Hit
CCTACGGGGGGCAGCAGTGATAAACCTTTAGCAATAAACGAAAGTTTAAC10920.5647409276852344No Hit
CCTACGGGTGGCTGCAGAGTCAGCTGTAGCAGTGGAGGCTGAGGCCCTCT9460.4892352725185273No Hit
CCTACGGGGGGCTGCAGTGATAAACCTTTAGCAATAAACCAAAGTTTAAC9210.476306221976283No Hit
CCTACGGGGGGCTGCAGTGATAAACCTTTAGCAATAAACCAAAGTTTAAG9190.4752718979329034No Hit
CCTACGGGAGGCAGCAGTGATTAACCTTTAGCAATAAACGAAAGTTTAAC9060.4685487916509363No Hit
CCTACGGGTGGCTGCAGTGATAAACCTTTAGCAATAAACCAAAGTTTAAG7780.4023520528746451No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGGACAATGGGGGCAACCCTGAT7710.39873191872281666No Hit
CCTACGGGGGGCTGCTGGGGCCTGACTCCAGCTGGGAGGGTTATGAACTG7490.38735435424564163No Hit
CCTACGGGCGGCAGCAGTGATTAACCTTTAGCAATAAACGAAAGTTTAAC7320.37856259987691543No Hit
CCTACGGGTGGCTGCAGTGATAAACCTTTAGCAATAAACCAAAGTTTAAC7320.37856259987691543No Hit
CCTACGGGAGGCTGCAGAGTCAGCTGTAGCAGTGGAGGCTGAGGCCCTCT6900.35684179496594487No Hit
CCTACGGGCGGCTGCAGAGTCAGCTGTAGCAGTGGAGGCTGAGGCCCTCT6720.3475328785755289No Hit
CCTACGGGTGGCAGCAGTGATAAACCTTTAGCAATAAACGAAAGTTTAAC6120.3165031572741424No Hit
CCTACGGGTGGCTGCTGGGGCCTGACTCCAGCTGGGAGGGTTATGAACTG6100.31546883323076286No Hit
CCTACGGGGAGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT5630.2911622182113434No Hit
CCTACGGGCGGCTGCAGTGATAAACCTTTAGCAATAAACCAAAGTTTAAC5610.2901278941679639No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGGGCAACCCTGAT5450.28185330182092744No Hit
CCTACGGGAGGCAGCAGTGATAAACCTTTAGCAATAAACGAAAGTTTAAC5150.26633844117023425No Hit
CCTACGGGCGGCTGCAGTGATAAACCTTTAGCAATAAACCAAAGTTTAAG5080.2627183070184058No Hit
CCTACGGGAGGCTGCAGTGATAAACCTTTAGCAATAAACCAAAGTTTAAC4950.2559952007364387No Hit
CCTACGGGAGGCTGCAGTGATAAACCTTTAGCAATAAACCAAAGTTTAAG4700.24306615019419436No Hit
CCTACGGGCGGCTGCTGGGGCCTGACTCCAGCTGGGAGGGTTATGAACTG4610.23841169199898637No Hit
CCTACGGGCGGCAGCAGTGGGGAATATTGGACAATGGGGGCAACCCTGAT4570.23634304391222724No Hit
CCTACGGGGGGCAGCAGAGTCAGCTGTAGCAGTGGAGGCTGAGGCCCTCT4250.21979385921815447No Hit
CCTACGGGGGGCTGCATGGACAGAACTTTGGACCCCTCTCCTGCTCAAAC4170.21565656304463626No Hit
CCTACGGGAGGCTGCTGGGGCCTGACTCCAGCTGGGAGGGTTATGAACTG3840.19859021632887366No Hit
CCTACGGGTGGCTGCATGGACAGAACTTTGGACCCCTCTCCTGCTCAAAC3660.18928129993845771No Hit
CCTACGGGCGGCAGCAGTGATAAACCTTTAGCAATAAACGAAAGTTTAAC3590.18566116578662928No Hit
CCTACGGGGTGCTGCAGTGATTAACCTTTAGCAATAAACGAAAGTTTAAC3570.18462684174324975No Hit
CCTACGGGGGGCTGCAGTGAGCCGTGATTGTGCCAGTGCACTCCAGCCTG3420.1768694114179031No Hit
CCTACGGGGGGCTGCAGGTATCTTTTTAATATACTGACTTCCTTTCCTTT3380.17480076333114403No Hit
CCTACGGGGTGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT3230.16704333300579738No Hit
CCTACGGGGGGCAGCAGTGATAAACCTTTAGCAATAAACCAAAGTTTAAC3140.16238887481058942No Hit
CCTACGGGGGGCAGCAGTGATAAACCTTTAGCAATAAACCAAAGTTTAAG3130.1618717127888996No Hit
CCTACGGGTGGCTGCAGTGAGCCGTGATTGTGCCAGTGCACTCCAGCCTG3110.1608373887455201No Hit
CCTACGGGGGGCTGCACTTCCCTCCACGTGCCAGCCCCAGCGAGCCATGC3020.1561829305503121No Hit
CCTACGGGTGGCTGCACTTCCCTCCACGTGCCAGCCCCAGCGAGCCATGC2950.15256279639848366No Hit
CCTACGGGGGGCTGCTGGTCCCAGCGCTGACAAGTCTTGCCTGGATTAGATACCCCAGTAGTC2880.14894266224665526No Hit
CCTACGGGGTGCTGCAGTGGGGAATATTGGACAATGGGGGCAACCCTGAT2760.14273671798637796No Hit
CCTACGGGGCGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT2750.1422195559646882No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGAT2680.13859942181285975No Hit
CCTACGGTGGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT2510.12980766744413358No Hit
CCTACGGGTGGCAGCAGAGTCAGCTGTAGCAGTGGAGGCTGAGGCCCTCT2490.12877334340075403No Hit
CCTACGGGCGGCTGCACTTCCCTCCACGTGCCAGCCCCAGCGAGCCATGC2480.12825618137906425No Hit
CCTACGGGAGGCTGCATGGACAGAACTTTGGACCCCTCTCCTGCTCAAAC2450.12670469531399492No Hit
CCTACGGGCGGCTGCAGTGAGCCGTGATTGTGCCAGTGCACTCCAGCCTG2280.11791294094526873No Hit
CCTACGGGGGGCAGCTGGGGCCTGACTCCAGCTGGGAGGGTTATGAACTG2280.11791294094526873No Hit
CCTACGGGTGGCTGCTGGTCCCAGCGCTGACAAGTCTTGCCTGGATTAGATACCCCAGTAGTC2220.1148099688151301No Hit
CCTACGGGTGGCTGCAGGTATCTTTTTAATATACTGACTTCCTTTCCTTT2190.11325848275006076No Hit
CCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGAT2110.10912118657654256No Hit
CCTACGGGAGGCAGCAGAGTCAGCTGTAGCAGTGGAGGCTGAGGCCCTCT2100.10860402455485278No Hit
CCTACGGGAGGCTGCACTTCCCTCCACGTGCCAGCCCCAGCGAGCCATGC2080.10756970051147324No Hit
CCTACGGGCGGCTGCATGGACAGAACTTTGGACCCCTCTCCTGCTCAAAC2060.10653537646809369No Hit
CCTACGGGAGGCTGCAGTGAGCCGTGATTGTGCCAGTGCACTCCAGCCTG1990.10291524231626527No Hit
CCTACGGGCGGCTGCAGGTATCTTTTTAATATACTGACTTCCTTTCCTTT1970.1018809182728857No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)