FastQCFastQC Report
Sun 11 Sep 2022
EGAF00002462824

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002462824
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences796106
Sequences flagged as poor quality0
Sequence length35-301
%GC59

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG43104754.14442297884955No Hit
GCTGCGTTCTTCATCGATGCGAGAACCGAGAGATCCGTCGTTGAAGCTTG491056.168148462641909No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG280973.5293038866683584No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGCTGAAAGTTT229852.8871783405727376No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT130881.6440021806141392No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT83231.045463795022271No Hit
GCTGCGTTCTTCATCGTTATGGGAACCTAGACATCCATCGTTGAAAATTT78370.9844166480343071No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT72590.9118132509992388No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT69000.866718753532821No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAAAGATCCGTTGTTGAAAGTTT67870.8525246638010516No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAACTTA61230.769118685200212No Hit
GCTGCGTTCTTCATCGATGTGAGAGCCAAGAGATCCGTTGTTGATAGTTA54760.6878481006298156No Hit
GCTGCGTTCTTCATCGATGCGAGAACCTAGACATCCATCGCTAAGAGTTA50240.631071741702738No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG34120.4285861430513022No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCGAGATATCCGTTGCCGAGAGTCG33990.42695319467508097No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGGCG33100.41577377886864314No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGAGATCCGTTGCCGAGAGTCG32870.4128847163568671No Hit
GCTGCGTTCTTCATCGATGCGAGAACCGAGATATCCGTTGCCGAGAGTCG32850.41263349352975603No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCT30180.37909524611044254No Hit
GCTGCGTTCTTCATCGATGTGATAGCCGAGGTATCCGTTGCTTACAGTTG29370.3689207216124486No Hit
GCTGCGTTCTTCATCGATGCGATAGCCGAGATATCCATTGCCGAGAGTCG29030.3646499335515622No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCTGAGAGTCG20850.2618997972631785No Hit
GCTGCGTTCTTCATCGTTGTGGGAACCTAGACATCCGTTGCTGAAAGTTG20500.25750339778873665No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTTG18480.23212989225052946No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGCGAGTCG18100.22735665853542117No Hit
GCTGCGTTCTTCATCGATGCGCGAGCCGAGATATCCGTTGCCGAGAGTCG17580.22082486503053617No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAAAGTCG17310.21743335686453813No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTCGCCGAGAGTCG16970.21316256880365178No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTCGAAAGTTG16130.20261121006499133No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGATAGTCG15160.19042690295010967No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTCAAAAGTTG14730.18502561216722396No Hit
GCTGCGTTCTTCATCGTTGTGATAGCCGAGGTATCCGTTGCTTACAGTTG14230.17874504148944992No Hit
GCTGCGTTCTTCATCGATGCAGTCCGCAGGTTCACCTACGGA14160.17786576159456155No Hit
GCTGCGTTCTTCACCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG12790.16065699793746058No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGTCGAGAGTCG11870.1491007478903563No Hit
GCTGCGTTCTTCATCGATATGGGAACCAAGATATCCATCGTTGAATATTT11700.14696535385991313No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGCGATATCCGTTGCCGAGAGTCG11680.14671413103280218No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGCGTCG11240.14118722883636098No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGATATCCGTTGCCGAGAGTCG10730.13478104674503144No Hit
GCTGCGTTCTTCATCGATGTGGGAACCTAGACATCCGTTGCTGAAAGTTG10630.13352493260947665No Hit
GCTGCGTTCTTCATCGATGCGAGCGCCGAGATATCCGTTGCCGAGAGTCG9820.12335040811148265No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGCTATCCGTTGCCGAGAGTCG9570.1202101227725956No Hit
GCTGCGTTCTTCATCGATGTGCGAGCCTAGACATCCACTGCTGAAAGTTG9500.11933084287770723No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGCCGAGAGTCG9240.11606494612526473No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGAGATCCGTTGCCGAGAGGCG9190.11543688905748732No Hit
GCTGCGTTCTTCATCGTTATAGGAGCCTAGATATCCATCGTTGAAAATTT9150.11493444340326539No Hit
GCTGCGTTCTTCATCGATGCCAGAACCGAGATATCCGTTGCCGAGAGTCG8420.10576481021371527No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)