FastQCFastQC Report
Sun 4 Sep 2022
EGAF00002462825

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002462825
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences625270
Sequences flagged as poor quality0
Sequence length35-301
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCGTAGGTGAACCTGCGGAAGGATCATTTACAACAAAATGAACTTTTCT16188925.89105506421226No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTTATAATTCATAAATGTTTTTC7444911.906696307195292No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTTACAACAAGTGAACTTCTAAC7428611.88062756889024No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTAGTGAAGATTTGGGCAGGCCA454317.265821165256608No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTATTGATTTGACTATACTTTTG345595.527052313400611No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTACAGAGTTCATGCCCGAAAGG324135.183840580869065No Hit
TCCGTAGGTGAACCTGCGGAGGGATCATTACCGAGTTTACAACTCCCAAA263764.21833767812305No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTAACACTAATCCACAAATCTTA177982.846450333455947No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGAATCCATCCACATCCAATCG76151.2178738784844947No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGACAACAAAATGAACTTTTCT31140.4980248532633902No Hit
TCCGTAGGTGAACCTGCAGAAGGATCATTAGTGAAGATTCAAGGGCCAGC29480.47147632222879715No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGATAATTCATAAATGTTTTTC19920.31858237241511667No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGACAACAAGTGAACTTCTAAC18000.287875637724503No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTAACAACAAAATGAACTTTTCT14420.2306203719992963No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTACTGATTTGCTTAATTGCACC14200.2271018919826635No Hit
TCCGTAGGTGAACCTGCAGAAGGATCATTTACAACAAAATGAACTTTTCT13700.21910534649031616No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGAAACCTGCCCAGCAGAA13430.21478721192444866No Hit
TCCGTAGGTGAACCTGCTGAAGGATCATTAACACTAATCCACAAATCTTA12620.20183280822684602No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTTACAACAACATGAACTTTTCT11990.1917571609064884No Hit
TCCGTAGGTGAACCTGCAGAAGGATCATTAGTGAAGATTTGGGCAGGCCA10530.16840724806883425No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTTACAACAAACTGAACTTTTCT9530.15241415708413963No Hit
TCCGTAGGTGAACCTGCGGAGGGATCATTACAAGTGACCCCGGTTTACCA8800.1407392006653126No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTTACAACAAAATGAACTCTTCT8700.13913989156684314No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTAACAACAAGTGAACTTCTAAC8370.1338621715418939No Hit
TCCGTAGGTGAACCTGCAGAAGGATCATTTACAACAAGTGAACTTCTAAC7060.11291122235194395No Hit
TCCGTAGGTGAACCTGCAGAAGGATCATTTATAATTCATAAATGTTTTTC6900.11035232779439282No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGACAACAAAATGAACTTTTCG6850.10955267324515808No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)