FastQCFastQC Report
Sun 4 Sep 2022
EGAF00002462855

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002462855
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences667716
Sequences flagged as poor quality0
Sequence length35-301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCGTAGGTGAACCTGCGGAAGGATCATTAATAAAACAATGAACTTTTAA10893716.314870393999843No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTATTGATTTGACTATACTTTTG10820916.205842004684627No Hit
TCCGTAGGTGAACCTGCGGAGGGATCATTACCGAGTTTACAACTCCCAAA10056315.060744388332765No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTCACGCCAATTATTCTTCTTGC9544214.293801556350305No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTACCACACTGATCCATGATCTC545718.172786034781254No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTAATAATTTATTAATGTTTGTT251043.759682260122567No Hit
TCCGTAGGTGAACCTGCAGATGGATCATTAACACATCCACATAAACCTAA147752.212767104577395No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTAACGGAGCCCGGAGGGCGAGG136182.0394898429871384No Hit
TCCGTAGGTGAACCTGCAGATGGATCATTAACACAATTAACAAACCTTAA105181.5752206027712383No Hit
TCCGTAGGTGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAACAGATTC27980.41904043036260924No Hit
TCCGTAGGTGAACCTGCAGAGGGATCATTACCGAGTTTACAACTCCCAAA10050.1505130923925741No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTATTGATTTTACTATACTTTTG9940.14886568541116282No Hit
TCCGTAGGTGAACCTGCAGAAGGATCATTATTGATTTGACTATACTTTTG9710.14542110717730294No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTCACGCCAATTCTTCTTCTTGC9680.14497181436419077No Hit
TCCGTAGGTGAACCTGCAGAAGGATCATTAATAAAACAATGAACTTTTAA9670.14482205009315338No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTATTGATTTGACTATCCTTTTG8720.1305944443446016No Hit
TCCGTAGGTGAACCTGCAGAAGGATCATTCACGCCAATTATTCTTCTTGC8280.12400481641895657No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTATTGATTTGCCTATACTTTTG8160.12220764516650791No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTACCACACTGATCCATGCTCTC7640.11441990307256378No Hit
TCCGTAGGTGAACCTGCAGCTGGATCATTTTCCGATGATCAAAACAACAA7000.10483498972617102No Hit
TCCGTAGGTGAACCTGCGGAGGGATCATTACCGAGTTTCCAACTCCCAAA6890.10318758274475974No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)