FastQCFastQC Report
Tue 13 Sep 2022
EGAF00002465996

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002465996
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14848061
Sequences flagged as poor quality0
Sequence length50
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT483540.32565868364899636No Hit
CAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT345170.23246806434860418No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT220890.1487668995971932No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)