FastQCFastQC Report
Mon 5 Sep 2022
EGAF00002466064

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002466064
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22671334
Sequences flagged as poor quality0
Sequence length50
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT392620.17317904627932348No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT319730.14102831355225942No Hit
CAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT228390.1007395506589952No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)