FastQCFastQC Report
Sat 10 Sep 2022
EGAF00002466092

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002466092
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3750253
Sequences flagged as poor quality0
Sequence length50
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT128170.34176360901517844No Hit
CAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT71270.19004051193346155No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT59420.1584426437363026No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)