FastQCFastQC Report
Fri 2 Sep 2022
EGAF00002466576

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002466576
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences152380
Sequences flagged as poor quality0
Sequence length251
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA33272.183357395983725No Hit
GTCCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA32792.1518571991074946No Hit
TTCCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACCCTGAATGCCCCAA28981.9018243864024151No Hit
AACCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA28791.8893555584722406No Hit
GTCCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACCCTGAATGCCCCAA27081.7771361071006693No Hit
GGCCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA26701.7521984512403204No Hit
ATCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA26581.7443234020212626No Hit
TGCCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA26191.7187294920593252No Hit
AGCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA24391.6006037537734612No Hit
ATCCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA24191.5874786717416984No Hit
GTCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA23811.5625410158813493No Hit
GGCCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACCCTGAATGCCCCAA23471.5402283764273528No Hit
TGCCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACCCTGAATGCCCCAA23221.5238220238876494No Hit
TACCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA23191.521853261582885No Hit
TTCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA22591.4824780154875967No Hit
TACCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA22561.4805092531828323No Hit
GGCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA21611.4181651135319595No Hit
ATCCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACCCTGAATGCCCCAA21571.4155400971256071No Hit
TGCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA21321.3991337445859036No Hit
GACCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA20941.3741960887255547No Hit
AACCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA20751.36172726079538No Hit
AACCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACTCCACCAGTTCCTT20581.3505709410683817No Hit
TACCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACCCTGAATGCCCCAA20541.3479459246620291No Hit
AGCCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA19621.2875705473159207No Hit
GACCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA19481.2783829898936867No Hit
ACCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA18941.2429452684079274No Hit
CTCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA18931.2422890143063394No Hit
GACCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACCCTGAATGCCCCAA18801.2337577109856936No Hit
ATCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACTCCACCAGTTCCTT18271.1989762436015226No Hit
AACCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACCCTGAATGCCCCAA17791.167476046725292No Hit
CGCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA17561.152382202388765No Hit
CACCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA17491.1477884236776479No Hit
AACCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGCCACATTAACAAA17251.1320383252395327No Hit
AGCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACTCCACCAGTTCCTT17171.1267882924268275No Hit
TCCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA17141.1248195301220631No Hit
AGCCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACCCTGAATGCCCCAA16891.1084131775823598No Hit
CTCCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA16761.0998818742617142No Hit
ATCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGCCACATTAACAAA16631.0913505709410682No Hit
TCCCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA16611.090038062737892No Hit
GTCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACTCCACCAGTTCCTT16541.0854442840267753No Hit
TTCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACTCCACCAGTTCCTT16261.0670691691823073No Hit
TACCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACTCCACCAGTTCCTT15921.0447565297283108No Hit
GCCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA15891.0427877674235464No Hit
AGCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGCCACATTAACAAA15591.0231001443759025No Hit
CTCCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACCCTGAATGCCCCAA15100.9909436933980837No Hit
TGCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACTCCACCAGTTCCTT15060.9883186769917313No Hit
GGCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACTCCACCAGTTCCTT14670.9627247670297939No Hit
GCCCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA14470.9495996849980313No Hit
GACCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACTCCACCAGTTCCTT14370.9430371439821499No Hit
TTCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGCCACATTAACAAA14370.9430371439821499No Hit
TCCCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACCCTGAATGCCCCAA13840.9082556765979787No Hit
CGCCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA13730.9010368814805093No Hit
GTCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGCCACATTAACAAA13500.8859430371439821No Hit
TACCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGCCACATTAACAAA13430.8813492584328653No Hit
GCCCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACCCTGAATGCCCCAA13420.8806930043312771No Hit
ACCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACTCCACCAGTTCCTT13330.8747867174169838No Hit
TGCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGCCACATTAACAAA13000.8531303320645753No Hit
CACCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA12980.8518178238613991No Hit
CCCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGGACAAGTTTCTCA12760.8373802336264601No Hit
CTCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACTCCACCAGTTCCTT12670.8314739467121669No Hit
GGCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGCCACATTAACAAA12470.8183488646804041No Hit
CGCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACTCCACCAGTTCCTT12280.8058800367502297No Hit
ACCCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA12230.8025987662422891No Hit
CACCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACTCCACCAGTTCCTT12060.7914424465152907No Hit
GACCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGCCACATTAACAAA12040.7901299383121144No Hit
CGCCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACCCTGAATGCCCCAA11980.7861924137025857No Hit
GCCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACTCCACCAGTTCCTT11790.7737235857724111No Hit
TCCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACTCCACCAGTTCCTT11600.7612547578422365No Hit
CTCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGCCACATTAACAAA11230.7369733560834755No Hit
ACCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGCCACATTAACAAA11170.7330358314739468No Hit
CACCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACCCTGAATGCCCCAA11140.7310670691691823No Hit
CACCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGCCACATTAACAAA11130.7304108150675942No Hit
CGCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGCCACATTAACAAA10910.7159732248326552No Hit
ACCCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACCCTGAATGCCCCAA10280.6746292164326027No Hit
TCCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGCCACATTAACAAA10030.6582228638928993No Hit
GCCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGCCACATTAACAAA9690.6359102244389028No Hit
CCCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACTCCACCAGTTCCTT9280.6090038062737892No Hit
CCCCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACTCCAGAAGGCAAGA8320.5460034125213282No Hit
CCCCCCAGAGGAATCCAGGGTTTTCCCAGTCACGACGCCACATTAACAAA7680.5040031500196877No Hit
CCCCCCAGACTCAGCCAGGGTTTTCCCAGTCACGACCCTGAATGCCCCAA7300.4790654941593385No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)