FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002466587

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002466587
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15421
Sequences flagged as poor quality0
Sequence length251
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA11137.217430776214254No Hit
TGGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA8475.492510213345438No Hit
GTGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA8285.3693016017119515No Hit
AGGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA7704.993191103041307No Hit
TTGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA7374.779197198625251No Hit
GAGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA6724.357694053563323No Hit
TAGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA6284.072368847675248No Hit
GGCAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA5363.4757797808183644No Hit
ATGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA4502.918098696582582No Hit
TGCAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA4222.7365281110174435No Hit
AGCAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA4052.626288826924324No Hit
CGCAGGAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG3982.5808961805330393No Hit
CTCAGGAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG3742.425264250048635No Hit
TTCAGGAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG2571.6665585889371635No Hit
ATCAGGAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG2531.6406199338564293No Hit
GCGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA2491.6146812787756954No Hit
TTCAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA2391.5498346410738602No Hit
CCCAGGAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG2221.4395953569807405No Hit
CTGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG2211.433110693210557No Hit
CGCAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA2191.42014136567019No Hit
CGGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA2131.3812333830490888No Hit
TCGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA2121.3747487192789054No Hit
GTCAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA2121.3747487192789054No Hit
CCCAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA1961.2709940989559692No Hit
ACGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA1951.2645094351857855No Hit
GCCAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA1871.2126321250243175No Hit
GCCAGGAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG1701.1023928409311978No Hit
CAGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA1671.0829388496206471No Hit
TGGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG1631.0570001945399132No Hit
TTGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG1440.9337915829064264No Hit
CTCAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA1430.9273069191362427No Hit
GACAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA1420.9208222553660593No Hit
AGGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG1410.9143375915958757No Hit
TGCAGGAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG1330.8624602814344077No Hit
GTCAGGAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG1320.855975617664224No Hit
CACAGGAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG1220.791128979962389No Hit
GGCAGGAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG1210.7846443161922054No Hit
ATGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG1180.7651903248816548No Hit
TCCAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA1170.7587056611114713No Hit
AAGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA1150.7457363335711042No Hit
CTGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA1150.7457363335711042No Hit
TAGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG1150.7457363335711042No Hit
TCGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG1080.7003436871798197No Hit
TCCAGGAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG1070.6938590234096362No Hit
AGCAGGAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG940.6095583943972505No Hit
CGGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG930.603073730627067No Hit
CAGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG900.5836197393165165No Hit
GTGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG890.5771350755463329No Hit
CACAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA840.5447117566954154No Hit
ACCAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA840.5447117566954154No Hit
GACAGGAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG790.5122884378444978No Hit
ATCAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA770.49931911030413073No Hit
GGGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG760.4928344465339472No Hit
CCGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG720.4668957914532132No Hit
GCGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG680.4409571363724791No Hit
CCGTTCAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA660.427987808832112No Hit
TACAGGAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG660.427987808832112No Hit
AAGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG620.402049153751378No Hit
AACAGGAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG530.34368717981972635No Hit
TACAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA530.34368717981972635No Hit
ACCAGGAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG510.3307178522793593No Hit
ACGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG510.3307178522793593No Hit
GAGTTCAGAGATCTCTGCTTCTGATGGCTCAAACACAGCGACCTCGGGTG460.29829453342844175No Hit
AACAGGAGTCACTGGATTTAGAGTCTCTCAGCTGGTACACGGCAGGGTCA450.2918098696582582No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)