FastQCFastQC Report
Sat 3 Sep 2022
EGAF00002466608

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002466608
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences297518
Sequences flagged as poor quality0
Sequence length289
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTGTGACCGTGAGCCTG6115120.553714397112106No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTAGCACGGTGAGCCGT4555915.313023077595306No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACTGTGAGTCTG3388111.387882413837145No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACTGTCAGCCGG247918.332605086078825No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACGGTTAACCTG164545.530421688771772No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCCAGTACGGTCAGCCTA149545.0262505125740295No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACCAGGAGCCGC139184.678036286880122No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTCCAGGCACTGTCCTC121984.099920004840044No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTAGGATGGAGAGTCGA117273.941610255513952No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCCAGCACGGTCAGCCTG113863.826995341458332No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTCCAGGCACTGTCCTC78512.638831936218985No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACAGTGAGCCAA65182.1907918176379244No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCCAAGACAGAGAGCTGG56541.9003892201480248No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCCAGCACTGAGAGCCGG39041.3121895145839917No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTGGTCAATATCTGATG34151.1478297111435274No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTGTCACAGTGAGCCTG11160.3751033550911205No Hit
CGACCTCGGGTGGGAACACGTTTTTTAGGTCCTCTGTGACCGTGAGCCTG5760.19360173165993316No Hit
CGACCTCGGGTGGGAAAACGTTTTTCAGGTCCTCGAGCACTGTCAGCCGG4440.14923466815453182No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTGTGACCGTGAGCCTGGT3430.11528714229055048No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTCTGCCCATCCCGCCC3070.10318703406180466No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)