FastQCFastQC Report
Fri 2 Sep 2022
EGAF00002466619

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002466619
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences125032
Sequences flagged as poor quality0
Sequence length289
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGCAGTGGTATCAACGCAGAGTACGGGATAACTGGAGGTTGCAGGTCAA80256.418356900633437Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAGATCAGAAGAGGAGGCTTCTC37583.0056305585770042Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAAAGCAGATTCTTTTTATGATT35842.866466184656728Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAGACTGAGTTTCCTTCCCTCAC23821.9051122912534393Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGAGTGCCAGGCTCATGGTATCC20501.6395802674515323Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAGAAGTAACTCTTATAACTGGA20431.633981700684625Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGATAACTGGAGGTTGCAGGTCA20121.609188047859748Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGATCTTAATTGGGAAGAACAAG18711.496416917269179Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAGGTCAATGACTGATCTTAATT17831.4260349350566255Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGTTCATATGTAAAATGAAGGGT17641.4108388252607331Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAGAAGAGACAACCTGATGATAG16651.3316590952716105Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGTGATCTTAATTGGGAAGAACAA15101.2076908311472263Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAGTCTTGCTCCTCACAGAGCTT14181.1341096679250111Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGTGATAACTGGAGGTTGCAGGTC13811.104517243585642Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGTTAACTGGAGGTTGCAGGTCAA13241.0589289141979654Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAGCCAGACTGGGTAAACAGTCA13061.0445325996544885Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGATCCATTCGAGCTGTATTTATA12771.0213385373344424Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGACATGAAGTGTCTACCTTCTGC12450.9957450892571502Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGCTGATCTTAATTGGGAAGAACA12300.9837481604709195Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGATACTCAAGGTTCAGATCAGA12240.9789493889564271Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGAACTCTTATAACTGGAGGTTG11740.9389596263356581Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAGCTTTCTAGGCAGGAGACAAG11660.9325612643163349Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGCAAGACCTGGGTTCCAGCCACT11500.919764540277689Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAAAGTATCTCTGCTATGTTCAT11460.9165653592680274Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGTTGATAGAAGTAACTCTTATA11040.8829739586665812Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAGTGTTTCCACAGCTCAGCCAT11010.8805745729093352Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAGATTTGCAGCTTTCTAGGCAG10980.8781751871520891Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGATACAGAAGTGGCGCCTCTGA10840.8669780536182737Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAGTCACTCAGTCTCAACCAGAG10600.8477829675603045Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGAAACGTTTGTTATTATTTTTT10440.8349862435216584Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAGAAGCCTCACACAGCCCAGTA10420.8333866530168276Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAGAGAGAAGATACCGGTGTCGG10230.8181905432209355Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGACCCACATGAAGTGTCTACCTT10230.8181905432209355Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGATGGCCTCTGCACCCATCTCGA10070.8053938191822893Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGGAAGTAACTCTTATAACTGGA10010.8005950476677971Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGATATTCCTGTGGCTGCAGCTGG9850.7877983236291509Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGTGGAAGAAATAAAGTATCTCT9690.7750015995905049Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGTTTTTTTCTAATTGGTAGGACA9610.7686032375711818Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGTTTGCAGCTCAGACACAGCAA9600.7678034423187664Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGCTACTTTTGGTGTTGTGTTTC9400.7518075372704588Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGATCCAGACTGAGTTTCCTTCCC9360.7486083562607972Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGAGACACAGCAAAAGAGCCTAG9340.7470087657559665Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAGAAGAGGAGGCTTCTCACCCT9260.7406104037366434Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGAAAGAAGGTTGGAATTATCGT9230.7382110179793973Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAAAAAGCAGATTCTTTTTATGA9220.7374112227269819Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAGTTTCTTCTTCCTGCAGCTGG9070.7254142939407512Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGTTAACTGGAGGTTGCAGGTCA8970.7174163414165973Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGATGATAGAAGTAACTCTTATA8830.706219207882782Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAGAGGAGAGAAGAGACAACCTG8650.6918228933393051Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGAAAGTATCTCTGCTATGTTCA8620.689423507582059Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGAGATTTGCAGCTTTCTAGGCA8230.6582314927378591Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGCACATGAAGTGTCTACCTTCTGC8150.6518331307185361Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAATTCTACTGGGTTTTGCATCC8020.6414357924371361Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGTGATGCCTCTGTGGACAGTTTA7980.6382366114274746Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGATGGCTCAGGAACTGGGAATGC7840.6270394778936592Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGCACACCTCTTGGTCTTGGTCTC7770.6214409111267516Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAGCAGAGCCTTTTTCTTATTGG7750.6198413206219209Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGGAACTGGTAAAGCAGATTCTT7580.6062448013308592Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAGTGGCTCAGCCGGAAGATCAG7450.5958474630494593Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGATGCCAGGTTCACCTCACAGTA7420.5934480772922133Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGAAGTAAAACTGTAAATGTTCT7110.5686544244673364Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGTGAGAAACCCCTATGGCTGCC6920.5534583146714441Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAGCCCAGAGAAGTCTGTTCCAG6910.5526585194190288Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAATGGCTCAGGAACTGGGAATG6750.5398617953803826Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAGAACACATCCAGGCTCCTTAA6560.5246656855844903Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGACTCTAAGCCCAAGAGAGTTT6270.5014716232644444Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGAGTTTCCTTCCCTCACCCACA6260.5006718280120289Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGTGTCTACCCTTCTTGCCTTTG6130.490274489730629Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGTTTCCTTCCCTCACCCACATG6080.486275513468552Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGGATCTTAATTGGGAAGAACAA5960.4766779704395675Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGTCTACCTTCTGCAGACTCCAA5920.4734787894299059Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGCCCTTGTAATTCTACTGGGTTT5670.45348390811952144Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGATTGACCAGCCCACTGAGATGA5630.45028472710985984Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGGTTCATATGTAAAATGAAGGG5610.44868513660502907Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGATATAAGATTTCAGTTCTCAGT5510.4406871840808753Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGATGGCTGCCAGAGGAGAGAAG5360.4286902552946446Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGATACATTATGCTTTTTCAACTT5280.4222918932753215Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGACCAGTGCAGCTGATACTCAAG5100.4078955787318446Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGACTTTCTGCTCAGCCCCTTCTT4900.39189967368353695Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGGCCTGCTGAAAGAATTCAGTT4080.32631646298547573Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAGAGAGAGAGAAGGAGAGAAAG3820.3055217864226758Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGACCGGTGTCGGGAAGCACCAG3460.27672915733572206Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGAACGTTGCTGAAGGGAATCCT3450.27592936208330665Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGGGATCAAAATTGTGCTCCACA3360.2687312048115682Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAGAGATGACAGCTACGGAAGGT3040.243137756734276Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGTGTCCTGAATGAATAGGTTTA2840.22714185168596837Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGAATAACTGGAGGTTGCAGGTCAA2790.2231428754238915Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGACCCTGCAGCAGGGACCTGTGA2720.21754430865698382Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGAGATCAGAAGAGGAGGCTTCT2610.2087465608804146Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAGAGAACTGTCCTGACCTTGCA2510.2007486083562608Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGATTGCCTCTCTCAACTGCACTT2510.2007486083562608Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGCCTCAAACTACTTCCCTTGGTA2390.19115106532727622Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAGACAGTGCCTCAAACTACTTC2180.17435536502655322Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGATTATTTATTCTGGTACAAGCA2120.16955659351206093Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAAACTACTTCCCTTGGTATAAG1990.15915925523066093Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGATTTGTTCTGGTACAAGCAGCC1960.1567598694734148Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGTTATTATTTTTTTTTCGTGTT1690.1351653976581995Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGATACTCCAATGGTGACAAAGAA1600.12796724038646107Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGGAGATATAGCATCTGAGGACT1530.12236867361955339Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGAGAAAAGAAGGTTGGAATTAT1510.12076908311472263Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGAGGCAGATGATTCTCGTTATTC1490.11916949260989187Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGGAGCCCAGAGAAGTCTGTTCCA1430.11437072109539957Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGCAATACCCCAACCGAGGCCTCC1430.11437072109539957Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGATTCTGGTACAAGCAGCCTCCC1430.11437072109539957Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGAGTAATTCTTCTCTCACCATGCC1320.10557297331883038Clontech SMARTer II A Oligonucleotide (100% over 25bp)
AAGCAGTGGTATCAACGCAGAGTACGGGATTTCTGTCTTACAATGTTCTG1300.10397338281399962Clontech SMARTer II A Oligonucleotide (100% over 25bp)

[WARN]Adapter Content

Adapter graph