FastQCFastQC Report
Sun 4 Sep 2022
EGAF00002466634

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002466634
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences495756
Sequences flagged as poor quality0
Sequence length289
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTAGCACGGTGAGCCGT17071234.43468157722751No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTGTGACCGTGAGCCTG11754223.7096474878771No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCCAGCACGGTCAGCCTG270185.449858398082928No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACTGTGAGTCTG252495.093029635546519No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACCAGGAGCCGC244534.932466778011764No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACTGTCAGCCGG219524.427984734425807No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTAGGATGGAGAGTCGA210294.241804436053219No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACGGTTAACCTG162023.268139972083041No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTGGTCAATATCTGATG52801.0650400600295307No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCCAGTACGGTCAGCCTA49771.0039212838573814No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTGGAAAGGGAAGAGGG48670.9817329492734329No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCCAAGACAGAGAGCTGG41760.8423498656597197No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACAGTGAGCCAA40400.814917015628656No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCCAGCACTGAGAGCCGG28360.5720556080007101No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTGTCACAGTGAGCCTG26840.5413953638483447No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTCCAGGCACTGTCCTC20630.41613212951532613No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTCCAGGCACTGTCCTC18960.3824462033742405No Hit
CGACCTCGGGTGGGAACACGTTTTTTAGGTCCTCTAGCACGGTGAGCCGT15010.30276991100460715No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTAGCATGGTGAGCCGT12500.2521401657266881No Hit
CGACCTCGGGTGGGAACACGTTTTTTAGGTCCTCTGTGACCGTGAGCCTG11350.22894327047983282No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTGTGGCCGTGAGCCTG7980.1609662817999177No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTAGCACGGTGAGTCGT6420.12949918911722702No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTGGAAAGGGAAGAGGT5790.11679132476460194No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTAGCACGGTGAGCCAT5260.10610058173779037No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)