FastQCFastQC Report
Fri 2 Sep 2022
EGAF00002466636

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002466636
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences155873
Sequences flagged as poor quality0
Sequence length289
%GC51

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTCCAGGCACTGTCCTC2140713.733616469818378No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACTGTGAGTCTG1965912.612190693705774No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTAGGATGGAGAGTCGA153269.832363526717264No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTCCAGGCACTGTCCTC141019.046467316340866No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACCAGGAGCCGC136048.727617996702444No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACTGTCAGCCGG115087.382933542050258No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTGTGACCGTGAGCCTG96596.196711425327029No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTAGCACGGTGAGCCGT89075.714267384344947No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACGGTTAACCTG54783.514399543217876No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCCAAGACAGAGAGCTGG37802.4250511634471654No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCCAGCACGGTCAGCCTG33412.1434116235653384No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCCAGCACTGAGAGCCGG27581.7693891822188577No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCCAGTACGGTCAGCCTA26181.6795724724615553No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACAGTGAGCCAA22061.415254726604351No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTGTCACAGTGAGCCTG14330.9193381791586741No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTCTGCCCATCCCGCCC8060.5170876290313268No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTGGTCAATATCTGATG7010.4497250967133499No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTAGTCCCAGGAGAAGG5550.35605909939502034No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTGGAAAGGGAAGAGGT3380.21684319927120158No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTGGAAAGGGAAGAGGG3110.19952140524657894No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTGGACCCTGCTGGTAC2760.17706722780725334No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCCCGTACTCTGCGTTGATA2440.15653769414844138No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCCCGTACTCTGCGTTGA2110.1353666125627915No Hit
CGACCTCGGAGCAGAACCCAACCTCCGAGCAGTACATGCTAAGACTTCAC1920.12317720195287188No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTAGCACGGTGAGCCAT1860.11932791439184463No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTACCCGTACTCTGCGT1820.11676172268449314No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCCAGTACGGTCAGCCTC1810.11612017475765526No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACTGTCAGCCAC1660.10649695585508716No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTAACTGTGAGTCTGGTGC1590.10200612036722204No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)