FastQCFastQC Report
Sat 3 Sep 2022
EGAF00002466642

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002466642
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences277523
Sequences flagged as poor quality0
Sequence length289
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTGTGACCGTGAGCCTG6208922.372560112134853No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTAGCACGGTGAGCCGT5700620.541000205388382No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACTGTCAGCCGG3455712.451940920212017No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACGGTTAACCTG195547.045902501774627No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACTGTGAGTCTG160095.768530896538305No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTAGGATGGAGAGTCGA126374.553496466959495No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACCAGGAGCCGC99193.574118181195793No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTCCAGGCACTGTCCTC92253.3240488175754805No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCCAGCACGGTCAGCCTG61382.2117085791087585No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTCCAGGCACTGTCCTC56582.038749941446295No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCCAGTACGGTCAGCCTA51431.853179736454276No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACAGTGAGCCAA48661.753368189303229No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCCAAGACAGAGAGCTGG26950.9710906843757093No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTGTCACAGTGAGCCTG23810.8579469089048475No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCCAGCACTGAGAGCCGG23640.8518212904876353No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTGGAAAGGGAAGAGGT6140.2212429240099019No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTGTCCCCACAATGTTA5760.20755036519495684No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTGGTCAATATCTGATG4490.16178839231342987No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTAGCACGGTGAGCCAT3530.12719666478093708No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTGTGACCGTGAGTCTG2860.10305452160721813No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTCTGCCCATCCCGCCC2810.10125286913156747No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)