FastQCFastQC Report
Mon 5 Sep 2022
EGAF00002466664

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002466664
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences983362
Sequences flagged as poor quality0
Sequence length289
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACCAGGAGCCGC16732617.015707338701315No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTAGCACGGTGAGCCGT15057015.311757013185378No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTAGGATGGAGAGTCGA13746213.97877892373307No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTGTGACCGTGAGCCTG13009513.229614323107869No Hit
CGACCTCGGAGCAGAACCCAACCTCCGAGCAGTACATGCTAAGACTTCAC645476.563910340240929No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACTGTGAGTCTG578705.884913185581708No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACTGTCAGCCGG549005.58288809207596No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCCAGTACGGTCAGCCTA464704.725624947882875No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACGGTTAACCTG397254.039712740577732No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCCAAGACAGAGAGCTGG240012.440708508158745No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTGTCACAGTGAGCCTG176361.7934392421102299No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACAGTGAGCCAA83330.8473990249775768No Hit
CGACCTCGGAGCAGAACCCACCCTCCGAGCAGTACATGCTAAGACTTCAC43910.44652935541540145No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTGGTCAATATCTGATG38380.39029370669194047No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCCAGCACTGAGAGCCGG35720.36324364781230106No Hit
CGACCTCGGAGCAGAACCCAACCTCCGCGCAGTACATGCTAAGACTTCAC31790.32327871119689394No Hit
CGACCTCGGGGCAGAACCCAACCTCCGAGCAGTACATGCTAAGACTTCAC18430.1874182650946447No Hit
CGACCTCGGAGCAGAACCCCACCTCCGAGCAGTACATGCTAAGACTTCAC17340.17633384247103304No Hit
CGACCTCGGAGCCGAACCCAACCTCCGAGCAGTACATGCTAAGACTTCAC16310.1658595715514734No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCCAGCACGGTCAGCCTG10890.11074253428544117No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)