FastQCFastQC Report
Sun 4 Sep 2022
EGAF00002466672

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002466672
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences567701
Sequences flagged as poor quality0
Sequence length289
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACCAGGAGCCGC17644231.08009321808487No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACTGTGAGTCTG8540015.043130098414482No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTGTGACCGTGAGCCTG5931710.448634052080234No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTAGCACGGTGAGCCGT493038.684677321336407No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCCAGTACGGTCAGCCTA404237.120473629604317No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACTGTCAGCCGG392616.915788416789824No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACGGTTAACCTG173363.053720180165263No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCCAGCACTGAGAGCCGG116992.0607679042312768No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTCCAGGCACTGTCCTC101501.7879130035000819No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCCAAGACAGAGAGCTGG85691.5094213327085912No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACAGTGAGCCAA72041.2689778598240975No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTCCAGGCACTGTCCTC71631.2617557481843436No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTGGTCAATATCTGATG68361.2041550041306956No Hit
CGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCCAGCACGGTCAGCCTG52910.9320046996570378No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTGTCACAGTGAGCCTG45860.8078196092661454No Hit
CGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTAGGATGGAGAGTCGA18090.31865365747109836No Hit
CGACCTCGGGTGGGAACACGTTTTTTCAGGTCCTCGAGCACCAGGAGCCG16370.2883560183970083No Hit
CGACCTCGGAGCAGAACCCAACCTCCGAGCAGTACATGCTAAGACTTCAC10510.18513266666784098No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)