FastQCFastQC Report
Wed 20 Sep 2023
EGAF00002481262

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002481262
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33503701
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACC1243520.3711589952405557No Hit
GTGTTCACTAGCAACCTCAAACAGACACCATGGTGCATCTGACTCCTGAG432340.12904246011507803No Hit
CAACTGTGTTCACTAGCAACCTCAAACAGACACCATGGTGCATCTGACTC368290.1099251691626546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)