FastQCFastQC Report
Thu 17 Nov 2022
EGAF00002483541

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002483541
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences466800837
Sequences flagged as poor quality0
Sequence length35-150
%GC42

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN13897110.29770962043069343No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC5046960.10811805806594987No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)