FastQCFastQC Report
Fri 15 Sep 2023
EGAF00002487283

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002487283
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68521998
Sequences flagged as poor quality0
Sequence length75
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTAGCTTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGG2741230.40005109016231544TruSeq Adapter, Index 10 (100% over 63bp)

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)