FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002488586

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002488586
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences106572
Sequences flagged as poor quality0
Sequence length35-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTTTGAAGTATGCCTCAAGGTCGGTCGTTGACATTGCTGAAAGTCCAA4820.45227639530082947No Hit
GTGCTGGTGAACAGACCAATTTATGCCTACAGCCTCCTAGTACAAAGACC3830.359381451037796No Hit
ATGTAAGACCGTTGGCAGGTTCCGGTGGGCGTTCACGGTGGTCTCCATGC3810.3575047854971287No Hit
CATGTATACAAGCTAAACAGGCTTTTACTTTCTCGCCAACTTACAAGGCC3530.3312314679277859No Hit
GTGGATGGTCGGTACGGCAGACGGAGGAGCGGGCGGTAGAGCCCCAAGCG3520.33029313515745223No Hit
GTAAACACACAGTCTTTGAAGTATGCCTCAAGGTCGGTCGTTGACATTGC2980.279623165559434No Hit
ACCATCCACGGGGCGCACCTCTCTTTACGCGGACTCCCCGTCTGTGCCTT2650.24865818413842286No Hit
CCTGTAAACAGGCCTATTGATTGGAAAGTATGTCAACGAATTGTGGGTCT2590.24302818751642083No Hit
GGATAATAGGGTTTGATTCCCTTATCTAAGGGCAAGTATTTGGTAACATT2430.2280148631910821No Hit
CGGTGGTCTCCATGCGACGTGCAGAGGTGAAGCGAAGTGCACACGGTCCG2390.2242615321097474No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN2380.22332319933941375No Hit
GGGTAAAGGTTCAGATACTGTTTACTTAGAAAGGCCTTGTAAGTTGGCGA2380.22332319933941375No Hit
GTGGTTGGTCGGTACGGCAGACGGAGGAGCGGGCGGTAGAGCCCCAAGCG2350.2205082010284127No Hit
GATGTATACTTGCGGGATAGCACGACAGAATTGTCAGTCCCGATAAGTTT2290.2148782044064107No Hit
GTGCAGAGGTGAAGCGAAGTGCACACGGTCCGGCAGATGAGAAGGCACAG2250.211124873325076No Hit
GTCGTTGACATTGCTGAAAGTCCAAGAGTCCTCTTATGTAAGACCGTTGG2190.20549487670307398No Hit
TCCAAAGAGTATGTAAATAATGTCTCGTCTGGAAGTAATGATTAACTACA2160.20267987839207297No Hit
GTGGTCTCCATGCGACGTGCAGAGGTGAAGCGAAGTGCACACGGTCCGGC2120.19892654731073828No Hit
CTTTTATATAAGATACCCGCCTTCCAAAGAGTATGTAAATAATGTCTCGT2020.18954321960740156No Hit
GGTGTAAGCAATTTGTGGGACCCCTAACAATAAATGAAAACAGGAGACTA1990.18672822129640057No Hit
ACCAACCACGGGGCGCACCTCTCTTTACGCGGACTCCCCGTCTGTGCCTT1960.18391322298539955No Hit
GCCTAGCAGCCATGGAAATGATGTATACTTGCGGGATAGCACGACAGAAT1940.18203655744473218No Hit
TATCCACATTGTGTAAAAGGGGCAGCGAACCCCAAAAGACCCACAATTCG1930.18109822467439854No Hit
CAGTAAACACACAGTCTTTGAAGTATGCCTCAAGGTCGGTCGTTGACATT1920.18015989190406487No Hit
ATATAAGATACCCGCCTTCCAAAGAGTATGTAAATAATGTCTCGTCTGGA1910.17922155913373117No Hit
GCTTTAATGCCTTTGTATGCATGTATACAAGCTAAACAGGCTTTTACTTT1870.1754682280523965No Hit
CATTTAAACCCTCACAAAACAAAAAGATGGGGATATTCCCTTAATTTCAT1840.1726532297413955No Hit
CAATAAATGAAAACAGGAGACTAAAATTAATTATGCCTGCTAGATTTTAT1840.1726532297413955No Hit
CCAAAAGACACCAAATATTCAAGAACAGTTTCTCTTCCAAAAGTAAGACA1800.1688998986600608No Hit
CTGGTGAACAGACCAATTTATGCCTACAGCCTCCTAGTACAAAGACCTTT1800.1688998986600608No Hit
ACTCACAACTGTGCCAGCAGCACCTCCTCCTGCCTCCACCAATCGGCAGT1770.1660849003490598No Hit
GTCCAAGAGTCCTCTTATGTAAGACCGTTGGCAGGTTCCGGTGGGCGTTC1740.16326990203805877No Hit
CTGCTAGGCTGTGCTGCCAACTGGATCCTGCGCGGGACGTCCTTTGTTTA1740.16326990203805877No Hit
GTCCGGCAGATGAGAAGGCACAGACGGGGAGTCCGCGTAAAGAGAGGTGC1730.1623315692677251No Hit
GTGTAAAAGGGGCAGCGAACCCCAAAAGACCCACAATTCGTTGACATACT1710.16045490372705778No Hit
ACATAAGAGGACTCTTGGACTTTCAGCAATGTCAACGACCGACCTTGAGG1660.1557632398753894No Hit
AGTCTAGACTCTGTGGTATTGTGAGGATTTTTGTCAACAAGAAAAACCCC1640.15388657433472208No Hit
GAAATGATGTATACTTGCGGGATAGCACGACAGAATTGTCAGTCCCGATA1640.15388657433472208No Hit
ACCAAATACTTGCCCTTAGATAAGGGAATCAAACCCTATTATCCAGAGCA1630.15294824156438838No Hit
ATCTAAGGGCAAGTATTTGGTAACATTGGGATAAAATCTAGCAGGCATAA1630.15294824156438838No Hit
GGTGAAGCGAAGTGCACACGGTCCGGCAGATGAGAAGGCACAGACGGGGA1580.14825657771272005No Hit
GTTCAGATACTGTTTACTTAGAAAGGCCTTGTAAGTTGGCGAGAAAGTAA1570.14731824494238638No Hit
ACCTAATCTCCTCCCCCAACTCCTCCCACTCAGTAAACACACAGTCTTTG1530.1435649138610517No Hit
GTGCACACGGTCCGGCAGATGAGAAGGCACAGACGGGGAGTCCGCGTAAA1530.1435649138610517No Hit
ATTTATGCCTACAGCCTCCTAGTACAAAGACCTTTAACCTAATCTCCTCC1510.14168824832038435No Hit
ATATGCAGGAGGAGTGCGAATCCACACTCCAAAAGACACCAAATATTCAA1510.14168824832038435No Hit
GTATGGATCGGTAGAGGAGACACAAAGGTTCCGCGCATGCGCTGATGGCC1490.139811582779717No Hit
GTTGATAGGTGTAAGCAATTTGTGGGACCCCTAACAATAAATGAAAACAG1440.13511991892804864No Hit
GCATCAAAGCAGGATATCCACATTGTGTAAAAGGGGCAGCGAACCCCAAA1400.13136658784671396No Hit
ACCTAACTTTAATCCTGATTGGCAAACTCCTTCTTTTCCTGACATTCATT1390.13042825507638028No Hit
ATCTGAACCTTTACCCCGTTGCTCGGCAACGGCCTGGTCTATGCCAAGTG1380.1294899223060466No Hit
AGTCTGTACAACACCTTGAGTCCCTTTATGCCGCTGTTACCAATTTTCTT1380.1294899223060466No Hit
CAATTACATATCCCATGAAATTAAGGGAATATCCCCATCTTTTTGTTTTG1360.12761325676537927No Hit
ACCTCATCTCCTCCCCCAACTCCTCCCACTCAGTAAACACACAGTCTTTG1360.12761325676537927No Hit
CCTCAAGGTCGGTCGTTGACATTGCTGAAAGTCCAAGAGTCCTCTTATGT1340.12573659122471192No Hit
CTCCAAAAGACACCAAATATTCAAGAACAGTTTCTCTTCCAAAAGTAAGA1330.12479825845437827No Hit
GCTTTGATGCCTTTGTATGCATGTATACAAGCTAAACAGGCTTTTACTTT1330.12479825845437827No Hit
GCATAGACCAGGCCGTTGCCGAGCAACGGGGTAAAGGTTCAGATACTGTT1310.12292159291371091No Hit
GGCTTTTACTTTCTCGCCAACTTACAAGGCCTTTCTAAGTAAACAGTATC1310.12292159291371091No Hit
CTCTTATGTAAGACCGTTGGCAGGTTCCGGTGGGCGTTCACGGTGGTCTC1260.11822992906204256No Hit
GGAACATATTGTACAAAAAATCAAATCATGTTTTAGGAAACTTCCTGTAA1260.11822992906204256No Hit
CATTAAAGCAGGATATCCACATTGTGTAAAAGGGGCAGCGAACCCCAAAA1250.1172915962917089No Hit
CTTCAAAGACTGTGTGTTTACTGAGTGGGAGGAGTTGGGGGAGGAGATTA1250.1172915962917089No Hit
CTATTATCCAGAGCATGTAGTTAATCATTACTTCCAGACGAGACATTATT1240.11635326352137522No Hit
CTGTTTACTTAGAAAGGCCTTGTAAGTTGGCGAGAAAGTAAAAGCCTGTT1220.11447659798070789No Hit
GTATGTAAATAATGTCTCGTCTGGAAGTAATGATTAACTACATGCTCTGG1220.11447659798070789No Hit
CTTTTACACAATGTGGATATCCTGCTTTGATGCCTTTGTATGCATGTATA1220.11447659798070789No Hit
GTCTTACATAAGAGGACTCTTGGACTTTCAGCAATGTCAACGACCGACCT1220.11447659798070789No Hit
GTATACATGCATACAAAGGCATTAAAGCAGGATATCCACATTGTGTAAAA1180.1107232668993732No Hit
CCCTTATCTAAGGGCAAGTATTTGGTAACATTGGGATAAAATCTAGCAGG1170.10978493412903952No Hit
GGTCTATGCCAAGTGTTTGCTGACGCAACCCCCACTGGTTGGGGCTTGGC1170.10978493412903952No Hit
GGGAATTAGTAGTCAGCTATGTCAATGTTAATATGGGCATAAAACTCAGA1160.10884660135870586No Hit
GCCTAATCATCTCATGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGC1160.10884660135870586No Hit
CCTTTACCCCGTTGCTCGGCAACGGCCTGGTCTATGCCAAGTGTTTGCTG1150.10790826858837219No Hit
GGATATCCACATTGTGTAAAAGGGGCAGCGAACCCCAAAAGACCCACAAT1150.10790826858837219No Hit
GTAGAGGAGACACAAAGGTTCCGCGCATGCGCTGATGGCCTATGGCCAAG1140.1069699358180385No Hit
GGTTCAGATACTGTTTACTTAGAAAGGCCTTGTAAGTTGGCGAGAAAGTA1110.1041549375070375No Hit
CATCATTTCCATGGCTGCTAGGCTGTGCTGCCAACTGGATCCTGCGCGGG1100.10321660473670381No Hit
CTAGTAAACTGAGCCAAGAGAAACGGACTGAGGCCCACTCCCATAGGAAT1090.10227827196637015No Hit
CCTCCTGCATATAGACCACAAAATGCCCCTATCTTATCAACACTTCCGGA1090.10227827196637015No Hit
GACCAATTTATGCCTACAGCCTCCTAGTACAAAGACCTTTAACCTAATCT1080.10133993919603648No Hit
GGATAGCACGACAGAATTGTCAGTCCCGATAAGTTTTGCTCCAGACCGGC1070.1004016064257028No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)