FastQCFastQC Report
Fri 2 Sep 2022
EGAF00002488735

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002488735
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences294701
Sequences flagged as poor quality0
Sequence length35-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGCTGGTGTCTACGGAGCAGTGATTTTTTGGAGAACACAGATAACATTA4530.15371512142815938No Hit
GTGCTGGTGCGTGAGGAGATGGACACAGACGGGAGCGGCAGGAGAAAAGA4140.14048136925222512No Hit
GTCTAGACTCGTGGTGGACTTCTCTCAATTTTCTAGGGGGGTCACCCGTG3940.13369482967482296No Hit
ACCTCCTGTCATCCAATTTGTCCTGGTTATCGCTGGATGTGTCTGCGGCG3270.11095992209052565No Hit
CCTCCAGCCTATAGACCACCAAATGCCCCTATCTTATCAACACTTCCGGA3240.10994194115391531No Hit
ACAGAAGGTTGGTGAGTGATTGGAGGTTGGGGACTGCGAATTTTGGCCAA3090.10485203647086368No Hit
GTGTGGGGATAAGATGACAGGCCTTGGAGACCCATGGAGTCCTGGCTTTA2990.10145876668216261No Hit
TCCCCACACCACGCATTTCTCTTTTAAAGACTTGTGGGATTGAAAACCTG2970.10078011272442239No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)