FastQCFastQC Report
Fri 2 Sep 2022
EGAF00002488915

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002488915
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences391684
Sequences flagged as poor quality0
Sequence length35-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN21650.5527414956955097No Hit
GTCTAGACTCGTGGTGGACTTCTCTCAATTTTCTAGGGGGATCACCCGTG12210.3117308851012551No Hit
GTATATGAACCTTTACCCCGTTGCCCGGCAACGGCCTGGTCTGTGCCAAG11760.30024203184199505No Hit
GTGTAAATGGAGCGGCAAAGCCCAAAAGACCCACAATTCTCTGACATACT11380.2905403335341755No Hit
AGTCTAGACTCTGCGGTATTGTGAGGATTCTTGTCAACAAGAAAAACCCC11260.28747663933170614No Hit
GTCTTTGAAGTAGGCCTCAAGGTCGGTTGTTGACATTGCTGGGAGTCCAA10660.27215816831935946No Hit
ATATGATCCTGTGGCAATGTACCCCAACTTCCAATTATATACCCCATGAA9980.25479723450536657No Hit
CTATATAAGAGGGAAACTACACGTAGCGCCTCATTTTGCGGGTCACCATA9710.24790392254981056No Hit
CTTATATAGAATCCCAGCCTTCCAAAGAGTATGTAAATAATGTCGGGTTT9300.23743630069137364No Hit
CCTCCAGCCTATAGACCACCAAATGCCCCTATCTTATCAACACTTCCGGA9200.23488322218931587No Hit
GTACGGGACCTTGCAAAACCTGCACGACTCCTGCTCAAGGCAACTCTATG8920.22773460238355409No Hit
ACATCATGGGAGGTTGGTCATCAAAACCTCGCAAAGGCATGGGGACGAAC8540.21803290407573453No Hit
GTATAAAGGGACTCAAGATGTTGTACAGACTTGGCCCCCAGTACCACATC8400.21445859417285362No Hit
GTCCCGTACTGGTTGTTGTGGATCCTGGAATTAGAGGACAAACGGGCAAC8240.2103736685695612No Hit
GTTCATATACTGTTTACTTAGAAAGGCCTTGTAAGTTGGCGAGAAAGTAA8120.20730997436709184No Hit
GTTTTGATGACCAACCTCCCATGATGTAGCTCTTGTTCCCAAGAATATGG7790.19888481531030117No Hit
GGATCATATTGTACAAAAAATCAAACACTGTTTTAGGAAACTTCCTGTCA7770.19837419960988958No Hit
TTATTATCCTGATCATGTAGTTAATCATTACTTTCAAACCCGACATTATT7680.1960764289580376No Hit
TCCTCAGGCCATGCAGTGGAATTCCACAGCTTTCCACCAAGCTCTGCAAG7660.19556581325762606No Hit
CCATTTACACAATGTGGTTACCCTGCATTAATGCCTTTGTATGCATGTAT7570.19326804260577404No Hit
CTCTTGTACATGTCCCACTTTTCAAGCCTCCAAGCTGTGCCTTGGATGGC7560.19301273475556827No Hit
GTACCACATCATCCATATAGCTGAAAGCCAAACAGTGGGGGAAAGCCCTA7420.18943842485268736No Hit
ACTGTGGAGTTACTCTCGTTTTTGCCTTCTGACTTCTTTCCTTCCGTCCG7350.18765126990124692No Hit
ATGTGGTACTGGGGGCCAAGTCTGTACAACATCTTGAGTCCCTTTATACC7110.18152388149630824No Hit
ACATCAAACCTCGCAAAGGCATGGGGACGAACCTTTCTGTTCCCAACCCT6890.17590710879178115No Hit
CATTAAGATTCCCGAGATTGAGATCTTCTGCGACGCGGCGATTGAGATCT6880.17565180094157534No Hit
GTATACATGCATACAAAGGCATTAATGCAGGGTAACCACATTGTGTAAAT6740.17207749103869446No Hit
GTTTGATGTAGCTCTTGTTCCCAAGAATATGGTGACCCGCAAAATGAGGC6610.16875848898601933No Hit
ATTATATACCCCATGAAATTTAGGGAATAACCCCATCTCTTTGTTTTGTT6160.15726963572675934No Hit
CATTTAAACCCTAACAAAACAAAGAGATGGGGTTATTCCCTAAATTTCAT6010.15344001797367265No Hit
CTTGTACATGTCCCACTTTTCAAGCCTCCAAGCTGTGCCTTGGATGGCTT5980.15267409442305532No Hit
CCTTTATACCGCTGTTACCAATTTTCTTTTGTCTTTGGGTATACATTTAA5880.15012101592099752No Hit
GGATAATAAGGTTTAATCCCTTTGTCTAGAGGCAAATATTTAGTGCTGTT5810.1483338609695571No Hit
GCCTGAGGATGACTGTCTCTTAGAGGTGGAGAGATGGGAGTAGGCTGCCT5780.14756793741893975No Hit
ATCTCAATGTTAGTATTCCTTGGACTCATAAGGTGGGAAATTTTACTGGG5670.1447595510666762No Hit
GCCTTAGAGTCTCCTGAGCATTGCTCACCTCACCATACAGCACTCAGGCA5640.14399362751605888No Hit
GTTTTAGGAAACTTCCTGTCAATCGGCCTATTGATTGGAAAGTATGTCAG5570.1422064725646184No Hit
ACCTATGGGAGTGGGCCTCAGTCCGTTTCTCTTGGCTCAGTTTACTAGTG5550.14169585686420685No Hit
ATATAAGAGGGAAACTACACGTAGCGCCTCATTTTGCGGGTCACCATATT5460.13939808621235486No Hit
TTCTTCTACTGTCCCTATCTTTAATCCTGAATGGCAGACTCCTTCTTTTC5340.1363343920098855No Hit
GCCTAATCATCTCTTGTACATGTCCCACTTTTCAAGCCTCCAAGCTGTGC5190.13250477425679885No Hit
CCCATAGGTATTTTGCGAAAGCCCAAGATGATGGGATGGGAATACAGGTG5060.12918577220412372No Hit
GTGCCAACAGTTCCTCCTCCTGCCTCCACCAATCGGCAGTCAGGAAGGCA5050.12893046435391797No Hit
ATATGAACCTTTACCCCGTTGCCCGGCAACGGCCTGGTCTGTGCCAAGTG5010.12790923295309484No Hit
GGGTAAAGGTTCATATACTGTTTACTTAGAAAGGCCTTGTAAGTTGGCGA5000.12765392510288906No Hit
CTCTTTACGCGGTCTCCCCGTCTGTGCCTTCTCATCTGCCGGTCCGTGTG5000.12765392510288906No Hit
GTATATAATTGGAAGTTGGGGTACATTGCCACAGGATCATATTGTACAAA4980.1271433094024775No Hit
ATTTGGAACAGGGTTGAGTGTCCCTGAACTGGAGCCACCAGCAGGAAAAT4970.12688800155227173No Hit
GGGTTGAGTGTCCCTGAACTGGAGCCACCAGCAGGAAAATACAGGCCCCT4970.12688800155227173No Hit
CTCCGAAAGAGACCAAATACTCAAGGACAGTTTCTCTTCCAAAAGTAAGG4880.12459023090041974No Hit
GTTTACTAGTGCCATTTGTTCAGTGGTTCGTAGGGCTTTCCCCCACTGTT4860.12407961520000818No Hit
GTAGAAGAATAAAGCCCAGTAAAATTTCCCACCTTATGAGTCCAAGGAAT4820.12305838379918506No Hit
CCTTTACCCCGTTGCCCGGCAACGGCCTGGTCTGTGCCAAGTGTTTGCTG4790.12229246024856773No Hit
ATATAGAGCTGAGGCTGTATCTAGTAGATCCCGGACGGAAGGAAAGAAGT4740.12101592099753883No Hit
CTTTCGGAGTGTGGATTCGCACTCCTCCAGCCTATAGACCACCAAATGCC4720.12050530529712727No Hit
CCTGTATTCCCATCCCATCATCTTGGGCTTTCGCAAAATACCTATGGGAG4720.12050530529712727No Hit
GCATTAATGCCTTTGTATGCATGTATACAAGCGAAACAGGCTTTTACTTT4640.11846284249548106No Hit
GCTCTATATCGGGAAGCCTTAGAGTCTCCTGAGCATTGCTCACCTCACCA4640.11846284249548106No Hit
CTGTTGGCACTGTGGCCAATATGCCCTGAGCCTGAGGGCTCCACCCCAAA4580.11693099539424638No Hit
CATGTATACAAGCGAAACAGGCTTTTACTTTCTCGCCAACTTACAAGGCC4470.11412260904198282No Hit
GTACGGCAGACGGAGAAGGGGACGATAGAGTCCCAAGCGGCCCCGCGAGG4430.11310137764115971No Hit
GCTTTGGGGCATGGACATTGACCCTTATAAAGAATTTGGAGCTACTGTGG4430.11310137764115971No Hit
GTATGGATCGGCAGAGGAGCCACAAAGGTTCCACGCATGCGCTGATGGCC4420.11284606979095393No Hit
GACCAGGCCGTTGCCGGGCAACGGGGTAAAGGTTCATATACTGTTTACTT4400.11233545409054238No Hit
TCCTTGGACTCATAAGGTGGGAAATTTTACTGGGCTTTATTCTTCTACTG4400.11233545409054238No Hit
TCCTTTGTCTACGTCCCGTCGGCGCTGAATCCCGCGGACGACCCCTCGCG4380.11182483839013081No Hit
GTATTTTCCTGCTGGTGGCTCCAGTTCAGGGACACTCAACCCTGTTCCAA4370.11156953053992505No Hit
CTTTAATCCTGAATGGCAGACTCCTTCTTTTCCTAAAATTCATTTACATG4320.11029299128889616No Hit
GTTCCAAATATTGCCTCTCACATCTCGTCAATCTCCTCGAGGACTGGGGA4320.11029299128889616No Hit
GGGTAACCACATTGTGTAAATGGAGCGGCAAAGCCCAAAAGACCCACAAT4230.10799522063704414No Hit
TCCTAAAACAGTGTTTGATTTTTTGTACAATATGATCCTGTGGCAATGTA4220.10773991278683838No Hit
CTAGTAAACTGAGCCAAGAGAAACGGACTGAGGCCCACTCCCATAGGTAT4200.10722929708642681No Hit
GTCTAGAGGCAAATATTTAGTGCTGTTAGGGTAAAACCTAGCAGGCATAA4190.10697398923622103No Hit
ATTTAGTGCTGTTAGGGTAAAACCTAGCAGGCATAATTAATTTTAGTCTC4180.10671868138601526No Hit
GGCTGGAGGAGTGCGAATCCACACTCCGAAAGAGACCAAATACTCAAGGA4160.1062080656856037No Hit
CTGCCGTACCGTCCGACCACGGGGCGCACCTCTCTTTACGCGGTCTCCCC4160.1062080656856037No Hit
CATTGAGATTCCCGAGATTGAGATCTTCTGCGACGCGGCGATTGAGATCT4120.1051868342847806No Hit
GTCTACGTCCCGTCGGCGCTGAATCCCGCGGACGACCCCTCGCGGGGCCG4120.1051868342847806No Hit
GTTTAAATGTATACCCAAAGACAAAAGAAAATTGGTAACAGCGGTATAAA4090.10442091073416325No Hit
GTCCAACTGATGATCGGGAAAGAATCCCAGAGGGTTGGGAACAGAAAGGT4090.10442091073416325No Hit
GTATTAACATAATTGACTACTAGATCCCTGGATGCTGGATCTTCCAAATT4040.10314437148313436No Hit
TCCAAAGAGTATGTAAATAATGTCGGGTTTGAAAGTAATGATTAACTACA3960.10110190868148813No Hit
ACTAGATACAGCCTCAGCTCTATATCGGGAAGCCTTAGAGTCTCCTGAGC3960.10110190868148813No Hit
CTCAAGGACAGTTTCTCTTCCAAAAGTAAGGCAAGAAATATGAAACCACA3950.10084660083128237No Hit
ATTTACATACTCTTTGGAAGGCTGGGATTCTATATAAGAGGGAAACTACA3940.10059129298107658No Hit
CTCTTATATAGAATCCCAGCCTTCCAAAGAGTATGTAAATAATGTCGGGT3920.10008067728066503No Hit
GTCTTACATAAGCGGACTCTTGGACTCCCAGCAATGTCAACAACCGACCT3920.10008067728066503No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)