FastQCFastQC Report
Sat 3 Sep 2022
EGAF00002488922

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002488922
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences559329
Sequences flagged as poor quality0
Sequence length35-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATCTAAACCCTAATAAAACCAAACGCTGGGGCTACTCCCTTAACTTCAT24570.43927634719458497No Hit
ATATAAGACCTTGGGCAAGACCTGGTGGGCGTTCACGGTGGTTTCCATGC20680.369728728530078No Hit
ATGTAAATATGGGCCTAAAAATCAGACAACTATTGTGGTTTCACATTTCC16870.3016113950823219No Hit
CATTTAAACCCTAATAAAACCAAACGCTGGGGCTACTCCCTTAACTTCAT16360.2924933268255356No Hit
GTCTAGACTCGTGGTGGACTTCTCTCAATTTTCTAGGGGGAGCACCCACG15910.2844479724813124No Hit
ATGTTAATATGGGCCTAAAAATCAGACAACTATTGTGGTTTCACATTTCC15900.28426918682921853No Hit
GTGCTGGTGAACAGACCAATTTATGCCTACAGCCTCCTAGTACATAAATC15720.2810510450915293No Hit
ATCCTAACCTTACCAAATATTTGCCCTTGGAGAAAGGCATTAAACCTTAT15660.27997833117896626No Hit
GTCTTTGAAGTATGCCTCAAGGTCGGTCGTTGACATTGCTGAGAGTCCAA15410.27550868987662No Hit
GTATGTAAATAATGCCTAGTTTTGAAGTAATGATTAACTGCATGTTCAGG14080.25173019814813824No Hit
TATTTACATTGACATAGCTGACTACTAATTCCCTGGATGCTGGATCGTCC13960.24958477032301202No Hit
TATTAACATTGACATAGCTGACTACTAATTCCCTGGATGCTGGATCTTCC13820.24708177119369817No Hit
CTTCTGCGACGCGGCGATTGAGACCTTCGTCTGCGAGGCGAGGGAGTTCT13000.2324213477220026No Hit
ATATAAGAGAGAAACTACACGCAGCGCTTCATTTTGTGGGTCACCATATT12370.22115785164009016No Hit
CTAAACAGGCTTTCACTTTCTCGCCAACTTACAAGGCCTTTCTGTGTCAA12100.21633063903355626No Hit
AGTCTAGACTCTGTGGTATTGTGAGGATTCTTGTCAACAAGAAAAACCCC11850.21186099773121006No Hit
TCTCATGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGG11790.210788283818647No Hit
ATATAAAAGAGAAACTACACGCAGCGCTTCATTTTGTGGGTCACCATATT11230.2007762873013915No Hit
ATAAAAGAGAAACTACACGCAGCGCTTCATTTTGTGGGTCACCATATTCT11210.2004187159972038No Hit
CTCTTACAGTTAATGAAAAAAGGAGATTAAAATTAATTATGCCTGCTAGG10100.18057350861478666No Hit
CTGTAAGAGGGCCCACATATTGTTCACATCTATTAATAATGTCCTCCTGT9640.17234936861846964No Hit
GTGTAAAAGGGGCAGCAAAGCCCAAAAGACCCACAATTCTTTGACATACT9500.16984636948915577No Hit
GGTTAGGATAGAACCTAGCAGGCATAATTAATTTTAATCTCCTTTTTTCA9220.164840371230528No Hit
CCCTTAACTTCATGGGATATGTAATTGGAAGTTGGGGTACTTTACCACAG9120.16305251470958954No Hit
TCTCTTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGG8960.16019194427608796No Hit
GTATACATGCATATAAAGGCATCAAGGCAGGATAGCCACATTGTGTAAAA8910.15929801601561872No Hit
GGAATGAGGTGTATTTCCGAGAGAGGACAACAGAGTTGTCAGTCCCGATA8550.15286173254024019No Hit
GCACGACTCCTGCTCAAGGAACCTCTATGTTTCCCTCTTGTTGCTGTACA8240.14731937732533087No Hit
CTCCCATAGGAATCTTGCGAAAGCCCATGATGATGGGATGGGAATACAAG8160.1458890921085801No Hit
TCTGCGGAGTTACTCTCTTTTTTGCCTTCTGACTTCTTTCCTTCTGTTCG7910.14141945080623392No Hit
GTCTTATATAAGAGGACTCTTGGACTCTCAGCAATGTCAACGACCGACCT7850.1403467368936708No Hit
CTCTTATATAGAATGCCAGCCTTCCACAGAGTATGTAAATAATGCCTAGT7660.1369498095038877No Hit
CTCCAAAAGACACCAAATACTCAAGAACAGTTTCTCTTCCAAAAGTAAGA7660.1369498095038877No Hit
GTTTTCGGAAATTGCCTGTAAATAGACCTATTGATTGGAAAGTATGTCAA7510.13426802472247995No Hit
GTATCGGGAGGCCTTAGAGTCTCCGGAACATTGTTCACCTCACCATACAG7490.13391045341829227No Hit
GTTTAAATGTATACCCAAAGACAAAAGAAAATTGGTAACAGCGGTAAAAA7390.1321225968973538No Hit
CCTAGTCTCCTCCCCCAACTCCTCCCAGTCCTTAAACAAACAGTCTTTGA7260.12979838342013378No Hit
GACCAGACCGTTGCCGGGCAACGGGGTAAAGGTGCAGGTATTGTTGACAC7220.12908324081175837No Hit
CTCTCTTATATAGAATGCCAGCCTTCCACAGAGTATGTAAATAATGCCTA7210.12890445515966453No Hit
GCACGGGACCATGCAAGACCTGCACGACTCCTGCTCAAGGAACCTCTATG7170.12818931255128915No Hit
CCTCCGCTCTGTATCGGGAGGCCTTAGAGTCTCCGGAACATTGTTCACCT7130.12747416994291375No Hit
GCCTACGGCCAAGCCCCATCCAGTGGGGGTTGCGTCAGCAAACACTTGGC7130.12747416994291375No Hit
CTTTTATATAGAATGCCAGCCTTCCACAGAGTATGTAAATAATGCCTAGT7100.1269378129866322No Hit
GTTGACAACAGTGCCAACAGCGCCTCCTCCTGCCTCCACCAATCGGCAGT7040.12586509907406912No Hit
CTTTTGGAGTGTGGATTCGCACTCCTACCGCTTACAGACCACCAAATGCC7000.1251499564656937No Hit
CTAGTAAACTGAGCCAGGAGAAACGGACTGAGGCCCACTCCCATAGGAAT6950.12425602820522448No Hit
CTCTTATATAAGACCTTGGGCAAGACCTGGTGGGCGTTCACGGTGGTTTC6900.12336209994475525No Hit
TATTAACATTGACATAGCTGACTACTAATTCCCTGGATGCTGGATCGTCC6880.12300452864056753No Hit
CTCCATGTTCGGTGCAGGGTCCCCAGTCCTCGAGAAGATTGACGATATGG6860.12264695733637986No Hit
TCTGTGGAGTTACTCTCTTTTTTGCCTTCTGACTTCTTTCCTTCTATTCG6720.12014395820706596No Hit
ATATGTTCCTGTGGTAAAGTACCCCAACTTCCAATTACATATCCCATGAA6720.12014395820706596No Hit
GTTGTCAACATGCCCTGAGCCTGAGGGCTCCACCCCAAAAGACTGCCGTG6710.11996517255497212No Hit
GGAAAATATAGGCCCCTCACTCTGGGATCTAGCAGAGCTTGGTGGAATGT6710.11996517255497212No Hit
ATACCACATCATCCATATAACTGAAAGCCAAACAGTGGGGGAAAGCCCTG6570.11746217342565825No Hit
CCTCCTTCCCATGGCTGCTCGGGTGTGCTGCCAACTGGATCCTGCGCGGG6480.11585310255681361No Hit
GCTAGATCCCAGAGTGAGGGGCCTATATTTTCCTGCTGGTGGCTCCAGTT6450.11531674560053207No Hit
CTATATAAGAGAGAAACTACACGCAGCGCTTCATTTTGTGGGTCACCATA6420.11478038864425053No Hit
CTTCTGGACTACCAAGGTATGTTGCCCGTTTGTCCTCTACTTCCAGGAAC6330.1131713177754059No Hit
GTCCCGTGCTGGTAGTTGATGTTCCTGGAAGTAGAGGACAAACGGGCAAC6300.11263496081912434No Hit
TATTTACATTGACATAGCTGACTACTAATTCCCTGGATGCTGGATCTTCC6220.11120467560237356No Hit
TTCCTAAAACATTGCTTGATTTTTAATACAATATGTTCCTGTGGTAAAGT6210.11102588995027972No Hit
GCCTGAGGATGACTGTCTCTTAGAGGTGGAGAGATGGGAGTAGGCTGTCT6200.11084710429818587No Hit
CCTCTATGTTTCCCTCTTGTTGCTGTACAAAACCTTCGGACGGAAACTGC6140.10977439038562277No Hit
GTCCGGCAGATGAGAAGGCACAGACGGGGAGACCGCGTAAAGAGAGGTGC6130.10959560473352893No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN6070.10852289082096585No Hit
GTCAACATGCCCTGAGCCTGAGGGCTCCACCCCAAAAGACTGCCGTGTGG6040.10798653386468429No Hit
GGATTAAAGACAGGTACAGTAGAAGAATAAAGCCCAGTAAAGTTTCCCAC6020.10762896256049659No Hit
CTTGTATTCCCATCCCATCATCATGGGCTTTCGCAAGATTCCTATGGGAG6010.10745017690840274No Hit
GCCTTAGAGTCTCCGGAACATTGTTCACCTCACCATACAGCACTCAGGCA5970.10673503430002734No Hit
TCAAAGCAGGATAGCCACATTGTGTAAAAGGGGCAGCAAAGCCCAAAAGA5960.1065562486479335No Hit
CCCATAGGAATCTTGCGAAAGCCCATGATGATGGGATGGGAATACAAGTG5950.10637746299583967No Hit
GTTCTATCCTAACCTTACCAAATATTTGCCCTTGGAGAAAGGCATTAAAC5900.10548353473537042No Hit
GGGTAAAGGTGCAGGTATTGTTGACACAGAAAGGCCTTGTAAGTTGGCGA5900.10548353473537042No Hit
GTACAGACTTGGCCCCCAATACCACATCATCCATATAACTGAAAGCCAAA5880.10512596343118272No Hit
CCCCTATCTTATCAACACTTCCGGAAACTACTGTTGTTAGACGACGAGGC5830.10423203517071347No Hit
AGTCTAGACTCTGTGGTATTGTGAGGATTCTTGTCAACGAGAAAAACCCC5800.10369567821443193No Hit
CATGTATACAATCTAAACAGGCTTTCACTTTCTCGCCAACTTACAAGGCC5790.10351689256233808No Hit
GACCTGACCGTTGCCGGGCAACGGGGTAAAGGTGCAGGTATTGTTGACAC5760.10298053560605654No Hit
CCTACCGCTTACAGACCACCAAATGCCCCTATCTTATCAACACTTCCGGA5720.10226539299768116No Hit
CTCCTACCGCTTACAGACCACCAAATGCCCCTATCTTATCAACACTTCCG5700.10190782169349345No Hit
ATATGTGGGCCCTCTTACAGTTAATGAAAAAAGGAGATTAAAATTAATTA5680.10155025038930576No Hit
GTGCAGAGGTGAAGCGAAGTGCACACGGTCCGGCAGATGAGAAGGCACAG5660.10119267908511806No Hit
CTTTAATCCTGAGTGGCAAACTCCCTCCTTTCCTAACATTCATTTACAGG5650.10101389343302421No Hit
GTCCAAGAGTCCTCTTATATAAGACCTTGGGCAAGACCTGGTGGGCGTTC5650.10101389343302421No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)