FastQCFastQC Report
Sat 3 Sep 2022
EGAF00002489770

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002489770
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences483675
Sequences flagged as poor quality0
Sequence length35-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATGTAAATAATGCCTAGTTTTGAAGTAATGATTAACTGCATGTTCAGG22170.4583656380834238No Hit
TAGCCACACTGTGTAAAAGGGGCAGCAAAGCCCAAAAGACCCACAATTCT19870.41081304595027657No Hit
ATCCTAACCTTACCAAATATTTGCCCTTGGATAAAGGCATTAAACCTTAT13800.28531555279888354No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN13620.28159404558846335No Hit
GTGTGGCTATCCTGCCTTGATGCCTTTATATGCATGTATACAAGCTAAGC12150.2512017367033649No Hit
GTGCTGGTGAACAGACCAATTTATGCCTACAGCCTCCTAGTACAAAGATC11860.24520597508657674No Hit
CTCTTACAGTTAATGAAAAAAGGAGATTAAAATTAATTATGCCTGCTAGG11560.23900346306920972No Hit
ATATAAGACCTTGGGCAAGACCTGGTGGGCGTTCACGGTGGTTTCCATGC11540.2385899622680519No Hit
CTTATATAGAATGCCAGCCTTCCACAGAGTATGTAAATAATGCCTAGTTT10830.22391068382694992No Hit
CTCCAAAAGACACCAAATACTCAAGAACAGTTTCTCTTCCAAAAGTAAGA8640.17863234610017056No Hit
AGTCTAGACTCTGCGGTATTGTGAGGATTCTTGTCAACGAGAAAAACCCC8470.17511758929032925No Hit
ATTGACAACAGTGCCAGCAGCTCCTCCTCCTGCCTCCACCAATCGGCAGT7320.1513412932237556No Hit
GTCTTATATAAGAGGACTCTTGGACTCTCAGCAATGTCAACGACCGACCT6950.1436915284023363No Hit
TTCTTCTACTGTGCCTATCTTTAATCCTGAGTGGCAAACTCCCTCCTTTC6880.14224427559828398No Hit
GGTTAGGATAAAACCTAGCAGGCATAATTAATTTTAATCTCCTTTTTTCA6810.14079702279423167No Hit
TCCACAGAGTATGTAAATAATGCCTAGTTTTGAAGTAATGATTAACTGCA6730.13914301958960046No Hit
GTCTAGACTCGTGGTGGACTTCTCTCAATTTTCTAGGGGGAGCACCCACG6700.13852276838786376No Hit
GTGTAAAAGGGGCAGCAAAGCCCAAAAGACCCACAATTCTTTGACAGACT6640.13728226598439033No Hit
TTATTAATAGATGTCAACAATATGTGGGCCCTCTTACAGTTAATGAAAAA6530.13500801157802245No Hit
ATGTTAATATGGGCCTAAAAATCAGACAACTATTGTGGTTTCACATTTCC6380.13190675556933892No Hit
GAGTATGTAAATAATGCCTAGTTTTGAAGTAATGATTAACTGCATGTTCA6220.1285987491600765No Hit
CATTTGAACCCTAATAAAACCAAACGTTGGGGCTACTCCCTTAACTTCAT6080.12570424355197188No Hit
CCCTTAACTTCATGGGATATGTAATTGGAAGTTGGGGTACTTTGCCACAG6060.1252907427508141No Hit
GTGGCAAAGTACCCCAACTTCCAATTACATATCCCATGAAGTTAAGGGAG6040.12487724194965627No Hit
CATGTATACAAGCTAAGCAGGCTTTCACTTTCTCGCCAACTTACAAGGCC6020.12446374114849848No Hit
GTCCTAAAACTCAAGCAATGTTTTCGGAAACTGCCTGTAAATAGACCTAT5930.12260298754328837No Hit
AGTCTGTACAACATCTTGAGTCCCTTTTTACCTCTATTACCAATTTTCTT5890.12177598594097275No Hit
CCTTTAAATGAATGTTAGGAAAGGAGGGAGTTTGCCACTCAGGATTAAAG5860.12115573473923606No Hit
GTCTTTGAAGTATGCCTCAAGGTCGGTCGTTGACATTGCTGAGAGTCCAA5760.11908823073344704No Hit
GTTGTCAATATGCCCTGAGCCTGAGGGCTCCACCCCAAAAGACCGCCGTG5610.11598697472476353No Hit
GTTTTATCCTAACCTTACCAAATATTTGCCCTTGGATAAAGGCATTAAAC5430.11226546751434333No Hit
GTCCAAAAAATCAAGCAATGTTTTCGGAAACTGCCTGTAAATAGACCTAT5420.11205871711376442No Hit
GGATAATAAGGTTTAATGCCTTTATCCAAGGGCAAATATTTGGTAAGGTT5370.11102496511086991No Hit
CTGTAAGAGGGCCCACATATTGTTGACATCTATTAATAATGTCTTCCTTT5340.11040471390913319No Hit
GTAGATGCCCAAACGGCCCCGAGACGGGTCGTCCGCGGGATTCAGCGCCG5310.1097844627073965No Hit
CTTTTACACAGTGTGGCTATCCTGCCTTGATGCCTTTATATGCATGTATA5290.10937096190623868No Hit
ATTTACATACTCTGTGGAAGGCTGGCATTCTATATAAGCGAGAAACTACA5290.10937096190623868No Hit
TCTCATGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGG5020.10378870109060837No Hit
CTGGTGAACAGACCAATTTATGCCTACAGCCTCCTAGTACAAAGATCATT5020.10378870109060837No Hit
CTATATAAGCGAGAAACTACACGCAGCGCTTCATTTTGTGGGTCACCATA4990.10316844988887165No Hit
GTATACATGCATATAAAGGCATCAAGGCAGGATAGCCACACTGTGTAAAA4930.10192794748539827No Hit
ATGTGGTATTGGGGGCCAAGTCTGTACAACATCTTGAGTCCCTTTTTACC4870.10068744508192486No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)