FastQCFastQC Report
Sat 3 Sep 2022
EGAF00002490535

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002490535
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences511697
Sequences flagged as poor quality0
Sequence length35-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN45020.8798175482756397No Hit
GTATGTAAATAATGCCTAGTTTGGAAGTAATGATTAACTATGTGTTCAGG14520.2837616792750397No Hit
GGATATTATCAATAGATGTCAACAATATGTAGGCCCTCTTACAGTTAACG9440.18448417715952997No Hit
CTCTTACAGTTAACGAAAAAAGGAGATTAAAATTGATTATGCCTGCTAGG6900.13484542610177508No Hit
GTCTAGACTCGTGGTGGACTTCTCTCAATTTTCTAGGGGGAGCACCCACG6000.1172568922624131No Hit
GTTCTATCCTAACCATACAAAATATTTGCCCTTAGATAAAGGCATTAAAC5670.1108077631879804No Hit
GTGTAAAGGGAGCGGCAAAGCCCAGAAGCCCCACAATTCGTTGACATACT5450.10650834380502525No Hit
ATCCTAACCATACAAAATATTTGCCCTTAGATAAAGGCATTAAACCTTAT5290.10338149334469422No Hit
CTCCAAAAGACACCAAATACTCAAGAACAGTTTCTCTTCCAAAAGTGAGA5150.10064549919190457No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)