FastQCFastQC Report
Wed 16 Nov 2022
EGAF00002528703

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002528703
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences450727283
Sequences flagged as poor quality0
Sequence length151
%GC23

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTAACAAATAAACATCCATCTCAAAAAAATCACCAACAATAACCAAAAT40638040.9016103868733413No Hit
ATTAACAAATAATACACTAAACTTTATAAAATACCCTCACTTTCCTACTC19662840.436246944474404No Hit
ATTAACAAATATAAATTATTCACATTTACCTTACATATACACACAAAAAA16612090.3685618915596019No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN5708440.12664953321674116No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)