FastQCFastQC Report
Mon 7 Nov 2022
EGAF00002528713

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002528713
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences492601529
Sequences flagged as poor quality0
Sequence length151
%GC31

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATCAACAAACAACATCCATCTCAAAAAAATCACCAACAATAACCAAAAT35314630.7169005356457187No Hit
CATCAACAAACATACACTAAACTTTATAAAATACCCTCACTTTCCTACTC19358220.3929792917877849No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN16533140.3356290840908048No Hit
CATCAACAAACTAAATTATTCACATTTACCTTACATATACACACAAAAAA14911010.30269922284386575No Hit

[OK]Adapter Content

Adapter graph