FastQCFastQC Report
Mon 7 Nov 2022
EGAF00002528717

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002528717
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences454773966
Sequences flagged as poor quality0
Sequence length151
%GC24

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TAAAACCCACCAACATCCATCTCAAAAAAATCACCAACAATAACCAAAAT30564970.6720914626850034No Hit
TAAAACCCACCATACACTAAACTTTATAAAATACCCTCACTTTCCTACTC15851500.3485577712247495No Hit
TAAAACCCACCTAAATTATTCACATTTACCTTACATATACACACAAAAAA12150170.2671694271962789No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)