FastQCFastQC Report
Mon 7 Nov 2022
EGAF00002528719

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002528719
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences495891448
Sequences flagged as poor quality0
Sequence length151
%GC25

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCATAAATTACAACATCCATCTCAAAAAAATCACCAACAATAACCAAAAT28950040.5837979282917579No Hit
CCATAAATTACATACACTAAACTTTATAAAATACCCTCACTTTCCTACTC15631270.31521555903097564No Hit
CCATAAATTACTAAATTATTCACATTTACCTTACATATACACACAAAAAA11770660.23736364172991342No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)