FastQCFastQC Report
Mon 12 Dec 2022
EGAF00002528811

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002528811
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences443468271
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTTGAACTCCGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT28104110.6337344030639793No Hit
TGTTGAACTCCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA19673110.44361933618470756No Hit
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGT10213320.2303055408444317Illumina Single End PCR Primer 1 (100% over 50bp)
TGTTGAACTCCGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC5957160.13433114361410536No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)