FastQCFastQC Report
Sun 12 May 2024
EGAF00002529254

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002529254
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52212236
Total Bases5.2 Gbp
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGCGCTGGTTGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT663950.12716367864421665No Hit

[OK]Adapter Content

Adapter graph