FastQCFastQC Report
Mon 5 Sep 2022
EGAF00002531271

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002531271
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17453473
Sequences flagged as poor quality0
Sequence length63
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT3095701.7736871051394758No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG686090.393096548749925No Hit
TCTTTGAGAGTTGTTGGTTTATGCTCATCCCTACTCATAACCCCAGCACTTAGATATTTTAAA237260.13593856076667377No Hit
TCTTTTTTTCATAATCAGGTTAGTGTAAGAAATTGCCATTTGAAACAATCCATTTTGTAACTG221760.1270578067757632No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)