FastQCFastQC Report
Mon 5 Sep 2022
EGAF00002531272

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002531272
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17453473
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG2492451.4280538893319399No Hit
AAAAAAAAAAAAAAAA943500.5405800897047826No Hit
CAAAAAAAAAAAAAAA281820.16146929611086575No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)