FastQCFastQC Report
Mon 5 Sep 2022
EGAF00002531273

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002531273
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46351182
Sequences flagged as poor quality0
Sequence length63
%GC36

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT8071521.7413838551085925No Hit
TCTTTGAGAGTTGTTGGTTTATGCTCATCCCTACTCATAACCCCAGCACTTAGATATTTTAAA712220.15365735441223483No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)