FastQCFastQC Report
Tue 13 Sep 2022
EGAF00002531282

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002531282
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37522795
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG15472054.123373538671626No Hit
AAAAAAAAAAAAAAAA1071600.28558640154604686No Hit
CAAAAAAAAAAAAAAA564020.1503139624860035No Hit
TTAATGGCTTTGAATG429550.11447707986571896No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)