FastQCFastQC Report
Tue 13 Sep 2022
EGAF00002531284

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002531284
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24707921
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG7930153.209557777038384No Hit
AAAAAAAAAAAAAAAA1761750.7130304488184174No Hit
CAAAAAAAAAAAAAAA721840.2921492261530219No Hit
NNNNNNNNNNNNNNNN463900.18775355482154893No Hit
CCAAAAAAAAAAAAAA320120.1295616899535983No Hit
AATTTGTCAGGGATTT278700.11279783515577858No Hit
ATGTTTCCCTTCATAC273780.11080657089683912No Hit
TTGTAATCCAAAGTGG265480.10744732428114853No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)