FastQCFastQC Report
Fri 31 Mar 2023
EGAF00002531308

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002531308
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences76173784
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG48559706.37485726060294No Hit
AAAAAAAAAAAAAAAA1415330.1858027690996682No Hit
CTAGTCGAATTTAGCC778470.102196577237124No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)