FastQCFastQC Report
Tue 13 Sep 2022
EGAF00002531312

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002531312
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22789842
Sequences flagged as poor quality0
Sequence length16
%GC37

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAA16012377.026099610519458No Hit
CAAAAAAAAAAAAAAA6372842.796351111166106No Hit
CCAAAAAAAAAAAAAA2930311.2857965404060283No Hit
GGGGGGGGGGGGGGGG2906081.2751646106190644No Hit
TAAAAAAAAAAAAAAA1613630.7080479101171478No Hit
ACAAAAAAAAAAAAAA1611650.7071791019876311No Hit
TCAAAAAAAAAAAAAA1217520.5342380170955113No Hit
CTAAAAAAAAAAAAAA960960.42166154552541435No Hit
ATAAAAAAAAAAAAAA782670.34342932259030146No Hit
ACCAAAAAAAAAAAAA780530.34249030774324807No Hit
TCCAAAAAAAAAAAAA727750.31933086679582945No Hit
AACAAAAAAAAAAAAA670160.29406083640246383No Hit
ATCAAAAAAAAAAAAA530480.23277037199292563No Hit
CCCAAAAAAAAAAAAA516060.22644299157493064No Hit
TACAAAAAAAAAAAAA472350.20726339392787368No Hit
AATAAAAAAAAAAAAA429660.18853136410511315No Hit
CTCAAAAAAAAAAAAA416100.18258134479387791No Hit
ACTAAAAAAAAAAAAA372570.16348072970404973No Hit
TTCAAAAAAAAAAAAA363330.15942629176630535No Hit
CCGGGTAAAGCTTGCT353400.15506908735918395No Hit
TTAAAAAAAAAAAAAA349480.15334902277953485No Hit
TACATATGCCGAGTAC341620.14990011778054452No Hit
CACAAAAAAAAAAAAA323820.14208962045458676No Hit
CAACCAGGTCCCTAGA317820.13945686854696052No Hit
ATTAAAAAAAAAAAAA297850.1306941926144113No Hit
ATCCAAAAAAAAAAAA274810.12058442528912663No Hit
AACCAAAAAAAAAAAA269850.11840801704548895No Hit
TCTAAAAAAAAAAAAA250320.10983840958616563No Hit
AAACAAAAAAAAAAAA246560.1081885517240532No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)