FastQCFastQC Report
Mon 12 Sep 2022
EGAF00002531320

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002531320
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14089779
Sequences flagged as poor quality0
Sequence length16
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG2982382.11669750107507No Hit
AAAAAAAAAAAAAAAA1585151.1250353891285307No Hit
CAAAAAAAAAAAAAAA559970.39742993839718854No Hit
CCAAAAAAAAAAAAAA271300.19255092645526944No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)