FastQCFastQC Report
Sun 2 Apr 2023
EGAF00002531321

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002531321
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51742535
Sequences flagged as poor quality0
Sequence length63
%GC36

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT11152072.1553002766486027No Hit
TCTTTGAGAGTTGTTGGTTTATGCTCATCCCTACTCATAACCCCAGCACTTAGATATTTTAAA2130330.41171736174116713No Hit
TCTTTTTTTCATAATCAGGTTAGTGTAAGAAATTGCCATTTGAAACAATCCATTTTGTAACTG610270.11794358355268059No Hit
TCTTTTAGAGTTGTTGGTTTATGCTCATCCCTACTCATAACCCCAGCACTTAGATATTTTAAA574810.11109042106267117No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)