FastQCFastQC Report
Mon 5 Sep 2022
EGAF00002531323

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002531323
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15634064
Sequences flagged as poor quality0
Sequence length63
%GC36

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT3799812.430468494947955No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG682110.4362973056781653No Hit
TCTTTGAGAGTTGTTGGTTTATGCTCATCCCTACTCATAACCCCAGCACTTAGATATTTTAAA302650.1935837028683009No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)